Gene Rfer_2521 details

Gene Information

• Locus tag: Rfer_2521
• ID: 3961877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2781754
• End bp: 2782371
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637917340
• Product: ThiJ/PfpI
• Protein accession: YP_523769
• Protein GI: 89901298
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.572774
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAGC GCCCGCCTGT GTCGGTCTGC ATCCTGGTGT TTGATGCGGT CGAGGTACTG 
GACTTTGCCG GGCCTTATGA GGTGTTCACC ACGGCCAGCC GGATGCATGG CAAGCGCAAC 
CCGGGCGCGG CGGCCCTGTT TGACGTGGCC TGCGTGTCGC GTGATGGTCA GCCGATTCAG 
GCGCGTGCCG GGCTGCGTGT GCTGCCCGAA CACAGCTTTG CCGACCACCC GCGCTGCGAT 
CTGCTGCTGG TGCCCGGCGG CGTGGTGGAC GCTGCCATGG CCTGCCCGCA AACGCTGGCG 
TGGATCGCCC GCACGGCGGC CCAGGCGCAG ATCACGGCAT CGGTGTGCAC CGGCGCGTTT 
TTGCTGGCGG CCAGTGGTGT GGTGCGCACC GGGCGCGTCA CCACCCACTG GGAAGACAGC 
AGCGATTTGC AGCAGCGCTT CCCTGCCCTG ACCGTCTGCG ACGACCCGCG CTGGATTGAC 
AACGGCCAGG TCGTCACCTC GGCTGGCATC AGTGCGGGCA TCGACATGTG CCTGCACCTG 
GTGGCTCGGC TGGGCGGGCT TGAATTGGCC CAGTTGACCG CACGGCAGAT GGATTACCAC 
GGCTCGTTTG AGGATTAA 

 

Protein sequence

MSQRPPVSVC ILVFDAVEVL DFAGPYEVFT TASRMHGKRN PGAAALFDVA CVSRDGQPIQ 
ARAGLRVLPE HSFADHPRCD LLLVPGGVVD AAMACPQTLA WIARTAAQAQ ITASVCTGAF 
LLAASGVVRT GRVTTHWEDS SDLQQRFPAL TVCDDPRWID NGQVVTSAGI SAGIDMCLHL 
VARLGGLELA QLTARQMDYH GSFED