| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2516 |
|---|
| Symbol | |
|---|
| ID | 3962950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2777770 |
|---|
| End bp | 2778720 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637917335 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_523764 |
|---|
| Protein GI | 89901293 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0713675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC CAGGAAAGCC AGAGACATCA CCCGGTTGGT ATAGGGATCG AGGGCAGTCA
TTTATTGAAG AACAATTCAG CAATGCTCTT GACAACATGG CCGGGCTAAT CGAAAAGGAA
CATTGGTTTG GAGACCCTGA AAAACACAGT CGTTACCGTG TCGATTTCAT CTTGAAAGAC
GCTCACTTAA TTATTGAGTT GGATGGGCAT GAGTACCATT CAACCAAAGA GCAGCTTGAA
AAGGACGCGG TGAGGCAGAG GTACCTAACA AGGGCTGGCT ACACAGTGAT CAGATTCAGA
GGCAGGGAGA TAAATAATAG CCCTGCGGAT TGTGTCGCAG AAGTACGACA AATCTACAAA
GAACGCATGC AACGGGCACC TTCAAAGTAT CGTGTCATGT ATATCGATTA CCAATTTCTG
GTCCGTCAGA TGTCAAAAGC ACTCAGCTTC TACAGAGAAC TGCATCCGAA CAAATCGTTG
GAATTCCCGT CCCTGGAAGC ATTTATCCCC CACGCCGTTG AGTGGCTCCA GGAAAAATCC
TTCATTACGG CATTTGTGTT CCTCCCTCCA GAGGAGCAAG AGGAGGTTGG TCCCTTGGAG
GGAACGATAA AAGAATACGA GAAGGGTGAA GTCAGAATTA ATATCGTTCC GGATGAGTGG
TACACGATAG AGCTTGGGGA ACACATGGTG AGTTTTTCTC ACTTGTTTGA TGACTTCTAC
CTAGTTGCTG ATGACCCTGT ATATGTCGAT CCATTACGGT CCGTTTTGCC CGAAGATTTT
AGTGAAGAGC AGTTGGGCGA ACATGCCTTC AAGTACCTTT CTGGTGGCAA ACTTCTCAGA
AAAGGCAATG ATGAGACCGC ATTTGTAGGG ACTGATTTGG CCCACGTTCG CTGGCAGGAT
GTTTGGTACC CAATTGGCGC ATCAATGGGA CTTAAGACTT ATGAGTTATG A
|
|---|
| Protein sequence | MKYPGKPETS PGWYRDRGQS FIEEQFSNAL DNMAGLIEKE HWFGDPEKHS RYRVDFILKD
AHLIIELDGH EYHSTKEQLE KDAVRQRYLT RAGYTVIRFR GREINNSPAD CVAEVRQIYK
ERMQRAPSKY RVMYIDYQFL VRQMSKALSF YRELHPNKSL EFPSLEAFIP HAVEWLQEKS
FITAFVFLPP EEQEEVGPLE GTIKEYEKGE VRINIVPDEW YTIELGEHMV SFSHLFDDFY
LVADDPVYVD PLRSVLPEDF SEEQLGEHAF KYLSGGKLLR KGNDETAFVG TDLAHVRWQD
VWYPIGASMG LKTYEL
|
|---|
| |