| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2509 |
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| Symbol | |
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| ID | 3962943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2770986 |
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| End bp | 2772593 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917328 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_523757 |
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| Protein GI | 89901286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.101717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA AATTTATTGA CCGGTTATTA GGCAAAACGT CAACCAAAAG CAAAAAACCT
CAATTTGGCA AGCGCGAAGA GGTGGGGGCG GCGGTGCACG GTATCGATCC GAAACTGGTC
GATGAGCGCG CGCTCAACGT GGTGCGCACC CTTAAAAATG CAGGGTTCGA GGCCTATGTC
GTTGGTGGCG CCGTGCGCGA CCTGATGGTC GGCCTGGCAC CTAAAGACTT TGATGTGGCG
ACCAATGCCA CCCCGGAGCA GGTCAAGGGT CTGTTTCGGC GTGCTTTCAT CATTGGGCGG
CGCTTTCGTA TCGTGCACGT GGTGTATGGA CGTGGCCGCG AACATGAGGT GATTGAGGTT
TCCACTTTCC GCGCCTACAT GGACAATGCG GCCGCCGAAC AGGTGGCGGG TAACGAGAAA
ACCAGCAAAA GCGAGTTGGC CGGGATGAAA CACGCGGTCG ACTCCAGCGG CCGTGTGCTG
CGCGACAACG TCTGGGGCCC GCAGGAGGAA GACGCGGTGC GGCGCGACTT CACCATCAAC
GCCATGTACT ACGACCCCGA AACGCAAATT GTGGTTGATT ACCACCATGG CATCAAAGAT
TCGAAAGACC GGGTGATCCG CATGATTGGC GACCCGGCGA CGCGCTACCG CGAAGACCCG
GTGCGCATCA TCCGTGCCGT GCGTTTTGCC GCCAAACTCA GCGGCTTGGG CTTCAAGCTC
GAAGCCAAAA CGGCGGCACC GCTGATCAAG TCGCAAGAGC TGCTGGCCGA GGTGCCGCAG
AGCCGTTTGT TTGACGAGAT GCTCAAGTTG CTGCAAACCG GCCATGCATT GGCCTCGATC
GAGCAGCTCA AAGCACTCGG TATGGCGCGC GGCATTTATC CGTTGCTTGA TGTGGTGGTG
CAGCGCGCTG AGCAAGCCTT CGTCAAGGCC GCCTTGCGAG ACACCGACCG CCGCGTGAGC
GAAGGCAAGC CGGTGGTGGC CAGTTTCCTG CTGGCCTGCG TCCTGTGGGC CGATGTGCGC
GACGGCTGGG CCAAACGCAT CAATGAACGC CAGCATGCCC ATCCGGCGCT GCAGGATGCG
ATCGAAGACG TGTTCAATTC CCATATTGGC GATGTGTCGG GCCGCGGCAA GCTTGGCGGT
GACATGCGTG AAATCTGGAT GATGCAGCCC CGTTTTGAGA AGCGCGTGGG CAGTGCGCCC
TTCGGTCTGG TCGAGCAGGC GCGCTTTCGC GCTGCTTTTG ACTTCATGCG GCTGCGTGCT
GAAACCGGCG AGATCGACGA GGTACTGGCC GACTGGTGGC AGGAGTTCAG CCTGGCCGAT
GACAACCTGC GCCAGGACAT GGTGGATCAG GTGCGTGAAG AACAGCAGCA ACAGCAGCGC
CAGCGGGCGC CGCGCGTGCA CAAGGCACCT GCGACACGCG ATGCGGGGTC GGTGGTACGC
GAGGCCACCC CCGCAGCCGA TGCGGATCAC ACGCGACCGG ATTCATTGCC CGCTTTTGCG
CCAGGCGAGC CGGCCACTGG AGTGGATGCA CCCAAAAAAA GGCGCCGGCG CCGGCGCAGC
AATGGCCCCA GGGAGGGTGG CGAACCGACG TCGGACGCCG GCGTTTGA
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| Protein sequence | MIKKFIDRLL GKTSTKSKKP QFGKREEVGA AVHGIDPKLV DERALNVVRT LKNAGFEAYV
VGGAVRDLMV GLAPKDFDVA TNATPEQVKG LFRRAFIIGR RFRIVHVVYG RGREHEVIEV
STFRAYMDNA AAEQVAGNEK TSKSELAGMK HAVDSSGRVL RDNVWGPQEE DAVRRDFTIN
AMYYDPETQI VVDYHHGIKD SKDRVIRMIG DPATRYREDP VRIIRAVRFA AKLSGLGFKL
EAKTAAPLIK SQELLAEVPQ SRLFDEMLKL LQTGHALASI EQLKALGMAR GIYPLLDVVV
QRAEQAFVKA ALRDTDRRVS EGKPVVASFL LACVLWADVR DGWAKRINER QHAHPALQDA
IEDVFNSHIG DVSGRGKLGG DMREIWMMQP RFEKRVGSAP FGLVEQARFR AAFDFMRLRA
ETGEIDEVLA DWWQEFSLAD DNLRQDMVDQ VREEQQQQQR QRAPRVHKAP ATRDAGSVVR
EATPAADADH TRPDSLPAFA PGEPATGVDA PKKRRRRRRS NGPREGGEPT SDAGV
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