| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2495 |
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| Symbol | |
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| ID | 3962988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2755795 |
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| End bp | 2757063 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917314 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_523743 |
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| Protein GI | 89901272 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTC TCGGCAGCCT CCACATTGCG GTGGCCATCT TGTTACTCTC CATCGGGGTC
GGGCTGTACG CTGATCTCAA GAGCGAGCAG ATGCACGGGC AAAGCCTGCG GATACAGACC
GGACTGGAGC GTATGGTCCG ACTGAACCAG TCGCTAACCA GTGTGATGGC CACGGCTGTG
ATCGAGAAGA ACAGCCTGCG TGCGGCCAGC TACAACTCGC TGCACACGAA GCTGGAGGCC
ACCATGCAGG AGGTCCAGGC GCTGACACAG CACATGACAC TGGCGGGTGA AATCCTGGCA
CTGCGTGACG AGCAGCGTGC CTTGCGTGCA CAGGAGAGTC AGGTTTTTGT GCACATACGG
GACGAGCAAT GGGACGCCGC CTACAAGGTC CTGTTGGGCG GGGATTACGT CATGGCGCTG
AAGATTTATG AAATCAACAG TGAATCGGCC GTCGGCGCCC TGACCATTGA GCTGTCCAAT
ACCGCCCGGC GACAAGACCT GCTGCGCCAG GCAACGCTGA TGCTGCGCCT GGCGGCGGCA
GCGCTGCTGC TGTGGACGGG GTGGCGCTAT TCCCGCCGTC TACAGGCCGA ATTGGCCGAG
CAGGTGCGCT TGCGTGGGGA GGTCACTGCG GCCAATGAGG CGTTGGAAGA GAAGGTCCGG
CTGCGTACCG CCGAGTTACA GGCCGCCAAC AGCCAGTTGG AAACCCTGAG CACCACCGAT
GGGCTGACCG GCCTGGCCAA CCGCCGCCGT TTTGACAAGT ATTGGGCCGA GGAATGGCAG
CGCGCACTGC GCCAGGCGAC GCCGCTGGCG GTGATCATGA TGGATGTGGA CCACTTCAAG
ACCTATAACG ACCACTACGG GCACCAGCAG GGAGACGAGT GCCTGCGGCG CGTGGGCGAG
GTGCTGCGGG CCACGGTCAG ACGCGCAGGT GAACTGGCGG CACGTTATGG CGGTGAAGAA
TTTGTGGTGG TCATGCCAGG TGCTTCGTTG GCGCAGGCGC AAGAAACCGC TGAGTCGATC
CTGGCCGCCA TTCGTGCCGA GCAGATGCCC CATGCCAGTT CACCGGTCGC CAGCGTGGTG
ACGATCAGCC TGGGCGTGGC AGCAGGCACC CCCGGCCCGG CCGGTGACCG TGCGCGCATG
CTGAACGAAG CCGATGTGGC TCTGTATGAC GCCAAGCACC AGGGCCGCAA CCGCGTGGTT
CCATCTTTGC CAGGACTGAC CCAGCCGAAC GTTACAAACG CCATCAGCAA TACCGTCACG
CTGCTTTAA
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| Protein sequence | MRFLGSLHIA VAILLLSIGV GLYADLKSEQ MHGQSLRIQT GLERMVRLNQ SLTSVMATAV
IEKNSLRAAS YNSLHTKLEA TMQEVQALTQ HMTLAGEILA LRDEQRALRA QESQVFVHIR
DEQWDAAYKV LLGGDYVMAL KIYEINSESA VGALTIELSN TARRQDLLRQ ATLMLRLAAA
ALLLWTGWRY SRRLQAELAE QVRLRGEVTA ANEALEEKVR LRTAELQAAN SQLETLSTTD
GLTGLANRRR FDKYWAEEWQ RALRQATPLA VIMMDVDHFK TYNDHYGHQQ GDECLRRVGE
VLRATVRRAG ELAARYGGEE FVVVMPGASL AQAQETAESI LAAIRAEQMP HASSPVASVV
TISLGVAAGT PGPAGDRARM LNEADVALYD AKHQGRNRVV PSLPGLTQPN VTNAISNTVT
LL
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