Gene Rfer_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2495 
Symbol 
ID3962988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2755795 
End bp2757063 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content63% 
IMG OID637917314 
Productdiguanylate cyclase 
Protein accessionYP_523743 
Protein GI89901272 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTC TCGGCAGCCT CCACATTGCG GTGGCCATCT TGTTACTCTC CATCGGGGTC 
GGGCTGTACG CTGATCTCAA GAGCGAGCAG ATGCACGGGC AAAGCCTGCG GATACAGACC
GGACTGGAGC GTATGGTCCG ACTGAACCAG TCGCTAACCA GTGTGATGGC CACGGCTGTG
ATCGAGAAGA ACAGCCTGCG TGCGGCCAGC TACAACTCGC TGCACACGAA GCTGGAGGCC
ACCATGCAGG AGGTCCAGGC GCTGACACAG CACATGACAC TGGCGGGTGA AATCCTGGCA
CTGCGTGACG AGCAGCGTGC CTTGCGTGCA CAGGAGAGTC AGGTTTTTGT GCACATACGG
GACGAGCAAT GGGACGCCGC CTACAAGGTC CTGTTGGGCG GGGATTACGT CATGGCGCTG
AAGATTTATG AAATCAACAG TGAATCGGCC GTCGGCGCCC TGACCATTGA GCTGTCCAAT
ACCGCCCGGC GACAAGACCT GCTGCGCCAG GCAACGCTGA TGCTGCGCCT GGCGGCGGCA
GCGCTGCTGC TGTGGACGGG GTGGCGCTAT TCCCGCCGTC TACAGGCCGA ATTGGCCGAG
CAGGTGCGCT TGCGTGGGGA GGTCACTGCG GCCAATGAGG CGTTGGAAGA GAAGGTCCGG
CTGCGTACCG CCGAGTTACA GGCCGCCAAC AGCCAGTTGG AAACCCTGAG CACCACCGAT
GGGCTGACCG GCCTGGCCAA CCGCCGCCGT TTTGACAAGT ATTGGGCCGA GGAATGGCAG
CGCGCACTGC GCCAGGCGAC GCCGCTGGCG GTGATCATGA TGGATGTGGA CCACTTCAAG
ACCTATAACG ACCACTACGG GCACCAGCAG GGAGACGAGT GCCTGCGGCG CGTGGGCGAG
GTGCTGCGGG CCACGGTCAG ACGCGCAGGT GAACTGGCGG CACGTTATGG CGGTGAAGAA
TTTGTGGTGG TCATGCCAGG TGCTTCGTTG GCGCAGGCGC AAGAAACCGC TGAGTCGATC
CTGGCCGCCA TTCGTGCCGA GCAGATGCCC CATGCCAGTT CACCGGTCGC CAGCGTGGTG
ACGATCAGCC TGGGCGTGGC AGCAGGCACC CCCGGCCCGG CCGGTGACCG TGCGCGCATG
CTGAACGAAG CCGATGTGGC TCTGTATGAC GCCAAGCACC AGGGCCGCAA CCGCGTGGTT
CCATCTTTGC CAGGACTGAC CCAGCCGAAC GTTACAAACG CCATCAGCAA TACCGTCACG
CTGCTTTAA
 
Protein sequence
MRFLGSLHIA VAILLLSIGV GLYADLKSEQ MHGQSLRIQT GLERMVRLNQ SLTSVMATAV 
IEKNSLRAAS YNSLHTKLEA TMQEVQALTQ HMTLAGEILA LRDEQRALRA QESQVFVHIR
DEQWDAAYKV LLGGDYVMAL KIYEINSESA VGALTIELSN TARRQDLLRQ ATLMLRLAAA
ALLLWTGWRY SRRLQAELAE QVRLRGEVTA ANEALEEKVR LRTAELQAAN SQLETLSTTD
GLTGLANRRR FDKYWAEEWQ RALRQATPLA VIMMDVDHFK TYNDHYGHQQ GDECLRRVGE
VLRATVRRAG ELAARYGGEE FVVVMPGASL AQAQETAESI LAAIRAEQMP HASSPVASVV
TISLGVAAGT PGPAGDRARM LNEADVALYD AKHQGRNRVV PSLPGLTQPN VTNAISNTVT
LL