Gene Rfer_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2494 
Symbol 
ID3962987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2754756 
End bp2755778 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID637917313 
Producthypothetical protein 
Protein accessionYP_523742 
Protein GI89901271 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCT TCAAAAATCT GCCAAGCCAT GGCCGCTCCG GAACGCCACG CCGACTGTTT 
CTTGGGCTGA TGGCTGCCGT TGCACTGCTT CCGGCCGCCT CCATGGCGCA GGGACAAAAA
GTTTTTCGCG TTGGCGTAAC CCAAATCGTG TCGCATGCCG CGCTGGATGC CGACGAAAAA
GGCTTCGAAG TGGGCCTGGC CAGTGCCGGT TTCAAGGAAG GGGTGAACGT GATGTACCTC
CGCCGCAACG CCCAGGGCGA TCTGGCCGCC GCCGACACCA TTGCCCGCGA ATTTGCGTCC
GAGAGAGTGG ACCTGATCCA CGCCATTGCC ACACCCACGG CCCAGGCGGT GATGCGCACT
GGCACCCGCA TTCCGGTGGT CTTTTCGTCT GTGACGGACC CGGTGCTGGC AGACATCGTG
CCCAGCAACA GTGCAGCGGG CCAAAAAACC GGTACACACG TCACTGGCGT GAGTGACCTG
TGGCCGGTGC GGCTGCAGTT CGAGACCTAT GCGCGGGCTG TTCCGCGGGC AAAAACCTGG
GGCACCATCT ACAACCCCAA AGAAAACAAT TCGCTGTCTC ACATCCAGGT CATGAGAGAG
ACCGCCCAAA ATCTGGGTCT CACCCTGGTG GAAGCGACCG TGGACAGCAG CGAGGAAGTC
GGGTCGGCGG CGGCCTGGCT GGCTGGCAAG GTTCAGGCCA TCACGGTCAC CTCGGACAAC
ACCACGATGG CCAACCTGGA AGCCATTGCC CGTGTGTGCG ATCAGCACAA GATTGCCCTT
TTTGCAGGCG ACATCGACAG CGTGGCGCGC GGCGCCGTCA TGGCCTATGG CCCCGACTAT
TTTCTGGTCG GCTACTCGGC CGGAAGAAAG GCGGCTCTGG TCCTCAAAGG CATCAGGCCC
GGCGACGTGC CATGGGGTCC GGTGGAAATA TTCAGCCTGG TCATCAACAC CCGCGCGGCC
AGGGCCCAGG GTGTCACGAT ACCGCCCGAG TTAATAGCCA GGGCTGACAA AGTCCTCAAC
TGA
 
Protein sequence
MTPFKNLPSH GRSGTPRRLF LGLMAAVALL PAASMAQGQK VFRVGVTQIV SHAALDADEK 
GFEVGLASAG FKEGVNVMYL RRNAQGDLAA ADTIAREFAS ERVDLIHAIA TPTAQAVMRT
GTRIPVVFSS VTDPVLADIV PSNSAAGQKT GTHVTGVSDL WPVRLQFETY ARAVPRAKTW
GTIYNPKENN SLSHIQVMRE TAQNLGLTLV EATVDSSEEV GSAAAWLAGK VQAITVTSDN
TTMANLEAIA RVCDQHKIAL FAGDIDSVAR GAVMAYGPDY FLVGYSAGRK AALVLKGIRP
GDVPWGPVEI FSLVINTRAA RAQGVTIPPE LIARADKVLN