Gene Rfer_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2493 
Symbol 
ID3962986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2753776 
End bp2754600 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID637917312 
Productgluconate 5-dehydrogenase 
Protein accessionYP_523741 
Protein GI89901270 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCA ATGACAATAA ACAGGAGACC CACATGACCC GTACCATCCA TCAACTTTTC 
GACATCAAAG GCAAGACCGC CCTGGTCACT GGCGGCTCCC GCGGTTTGGG GCTGCAAATG
GCGCATGCGC TGGGCGAGGC CGGTGCGCGC ATCATGCTCA GCGCGCGCAA GGCCGATGAG
CTGGAGCAGG CCACCGCCGA GTTGCAGGCT GCGGGCATTG ACGCCCGCTG GATCGCGGCC
GATTGCGCCA AAGAGGCCGA TATTCACCGT TTGGCGGACG AGACGCTGCA GCGCATGGGC
GATGTGGACA TTTTGGTCAA CAACGCGGGC GCGGCGTGGG GCGCACCTGC CGAAGATCAT
CCGATTGAGG CCTGGGACAA GGTGATGAAC CTCAACGTAC GCGGTTACTT TATCTTGAGC
CAGGTGATCG CCAAAAAGAG CATGATTGCG CGCCGCTCGG GACGCATCAT CAACGTGGCC
TCGATCGCCG GGCTGGGCGG CAATCCGCCC GAGATGACCA CCATTGCCTA CAACACCTCC
AAGGGGGCCG TGATCAACTT CACCCGCGCG CTGGCGGCCG AATGGGGCAA ATACAACATC
AACGTCAACG CCATCTGCCC TGGGTTTTTC CCGAGCAAGA TGACCGCCGG TACGCTGGCT
GCCCTGGGTG AGGAAAAACT GGCGGCCGGT GCGCCTTTGA GACGCCTGGG CGACGATGAA
GACCTGAAAG GCTTGTGTGT GCTGTTTGCC AGCGATGCGG GCAAGCACAT CACCGGCCAG
TGGCTGGCGG TGGACGGCGG CGTCAGCGTG CTCATCGGCG GCTAG
 
Protein sequence
MRLNDNKQET HMTRTIHQLF DIKGKTALVT GGSRGLGLQM AHALGEAGAR IMLSARKADE 
LEQATAELQA AGIDARWIAA DCAKEADIHR LADETLQRMG DVDILVNNAG AAWGAPAEDH
PIEAWDKVMN LNVRGYFILS QVIAKKSMIA RRSGRIINVA SIAGLGGNPP EMTTIAYNTS
KGAVINFTRA LAAEWGKYNI NVNAICPGFF PSKMTAGTLA ALGEEKLAAG APLRRLGDDE
DLKGLCVLFA SDAGKHITGQ WLAVDGGVSV LIGG