Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2493 |
Symbol | |
ID | 3962986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2753776 |
End bp | 2754600 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917312 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_523741 |
Protein GI | 89901270 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTCA ATGACAATAA ACAGGAGACC CACATGACCC GTACCATCCA TCAACTTTTC GACATCAAAG GCAAGACCGC CCTGGTCACT GGCGGCTCCC GCGGTTTGGG GCTGCAAATG GCGCATGCGC TGGGCGAGGC CGGTGCGCGC ATCATGCTCA GCGCGCGCAA GGCCGATGAG CTGGAGCAGG CCACCGCCGA GTTGCAGGCT GCGGGCATTG ACGCCCGCTG GATCGCGGCC GATTGCGCCA AAGAGGCCGA TATTCACCGT TTGGCGGACG AGACGCTGCA GCGCATGGGC GATGTGGACA TTTTGGTCAA CAACGCGGGC GCGGCGTGGG GCGCACCTGC CGAAGATCAT CCGATTGAGG CCTGGGACAA GGTGATGAAC CTCAACGTAC GCGGTTACTT TATCTTGAGC CAGGTGATCG CCAAAAAGAG CATGATTGCG CGCCGCTCGG GACGCATCAT CAACGTGGCC TCGATCGCCG GGCTGGGCGG CAATCCGCCC GAGATGACCA CCATTGCCTA CAACACCTCC AAGGGGGCCG TGATCAACTT CACCCGCGCG CTGGCGGCCG AATGGGGCAA ATACAACATC AACGTCAACG CCATCTGCCC TGGGTTTTTC CCGAGCAAGA TGACCGCCGG TACGCTGGCT GCCCTGGGTG AGGAAAAACT GGCGGCCGGT GCGCCTTTGA GACGCCTGGG CGACGATGAA GACCTGAAAG GCTTGTGTGT GCTGTTTGCC AGCGATGCGG GCAAGCACAT CACCGGCCAG TGGCTGGCGG TGGACGGCGG CGTCAGCGTG CTCATCGGCG GCTAG
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Protein sequence | MRLNDNKQET HMTRTIHQLF DIKGKTALVT GGSRGLGLQM AHALGEAGAR IMLSARKADE LEQATAELQA AGIDARWIAA DCAKEADIHR LADETLQRMG DVDILVNNAG AAWGAPAEDH PIEAWDKVMN LNVRGYFILS QVIAKKSMIA RRSGRIINVA SIAGLGGNPP EMTTIAYNTS KGAVINFTRA LAAEWGKYNI NVNAICPGFF PSKMTAGTLA ALGEEKLAAG APLRRLGDDE DLKGLCVLFA SDAGKHITGQ WLAVDGGVSV LIGG
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