Gene Rfer_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2488 
Symbol 
ID3962981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2749759 
End bp2750673 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID637917307 
Producthypothetical protein 
Protein accessionYP_523736 
Protein GI89901265 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATGCT TTGTGATCAC TGATTTCAAA AACAAGACCG CCGTTCTCAC CGGCGCGGGT 
TCCGGCTTTG GTCTGGAATG CGCCCGCATT GGCGCCCGGC TGGGCATGAA CCTGGTGCTG
GCCGATGTGC AGCAAGACGC CCTTGACCGA GCCAGCGCCG AGATGCAGGC ACTGGGCGCG
CCGGTGCTGG CATTTCAGCT TGACGTTGCC CAAGCAGCCC AAGTCGAAGC CTTGGGCCGG
GCGGTGCAAG CGCGTTTTGG CGCGCCGCAT CTGGTCTTTA ACAACGCCGG CGTCGGCGCC
GGTGGGCTGA TCTGGGAGAA CAGCGCGGCC GACTGGGAAT GGGTGCTGGG CGTCAACCTG
ATGGGCGTCG CCCACGGCTT GCGCGTGTTC ACGCCGTTGA TGCTGGACGC CGCCAAAAAA
GACCCGGCCT ACCGCGGCCA TATCGTCAAC ACCGCCAGCA TGGCCGGTTT GCTCAATGCA
CCCAATATGG GCATCTACAA CGCCAGCAAG CACGCGGTGG TGAGCATGAG CGAGACGCTG
TACCAGGACC TGGCCTTGGT CACGGATCAG ATCAGCGCCT CGGTGTTGTG CCCGTTTTTT
GTGCCGACCG GCATCAGCCA GAGCCATCGC AACCGCCCGG TGGACGCAGC CACCGTCAAA
CCGACGCGCA GCCAGCTGAT CGGGCAGGCC ATGAGCGACA AGGCGGTGGG CTCGGGCAAG
GTCAGTGCTG CCGATGTGGC GCAAAAAGTG TTCGACGCCG TGGCCACCCG GCAGTTCTAC
ATCTACAGCC ACCCCAAAGC GCTGGCCTCG GTGCAGACCC GGCTGGAAGA CATCATGCTG
GGGCGCAACC CCACCGATCC CTTTGCGCTC AAGCCGGAAC TGGGGCTGGA ATTGAAGCAA
GCCTTGCGGG CGTAG
 
Protein sequence
MRCFVITDFK NKTAVLTGAG SGFGLECARI GARLGMNLVL ADVQQDALDR ASAEMQALGA 
PVLAFQLDVA QAAQVEALGR AVQARFGAPH LVFNNAGVGA GGLIWENSAA DWEWVLGVNL
MGVAHGLRVF TPLMLDAAKK DPAYRGHIVN TASMAGLLNA PNMGIYNASK HAVVSMSETL
YQDLALVTDQ ISASVLCPFF VPTGISQSHR NRPVDAATVK PTRSQLIGQA MSDKAVGSGK
VSAADVAQKV FDAVATRQFY IYSHPKALAS VQTRLEDIML GRNPTDPFAL KPELGLELKQ
ALRA