| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2483 |
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| Symbol | |
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| ID | 3962976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2737692 |
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| End bp | 2740115 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917302 |
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| Product | RNA binding S1 |
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| Protein accession | YP_523731 |
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| Protein GI | 89901260 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAA TCATCGCGCA AATCGCGCAG GAACTCCGGG TTCAAAACAA ACAGGTGCAG
GCCGCAGTCG ATTTGCTCGA CGGTGGTGCC AGCGTGCCTT TCATCGCCCG CTACCGCAAG
GAAGCCACCG ACGGGCTCGA CGACATCCAG TTGCGCGAGC TGGAGGCGCG CCTGGGCTAT
CTGCGTGAGC TGCGTGACCG CCTCCAGACC GTCATCAAGG CCATCGATGA GCAGGGCAAA
CTCACGCCTG AGCTGCTGGC GGCGCTGGTC GCGGCTGCCA GCAAGCAAGA ACTTGAAGAC
CTGTACCTGC CATTCAAACT CAAGCGCCGC ACCAAAGGCC AGTTGGCGCG CGAGGCTGGG
CTGGAGCCGC TGGCCGACGC CCTGTTTGCC AACCCTGAGC TGGTCCCGGC GGACGAAGCC
CAGGCCTACG TGATTGCCAT GCGACCGGTG GTGGAGGGCG AGGACAAGCA GCCTGATTTC
TCCACCGTGC CAGCGGTGCT GGACGGCGTG CGCGATATTT TGAGCGAACG CTGGGCCGAG
AACCCGGCCG TGGTGCAGGA CTTGCGCGAA TGGCTGTGGC AAGAGGGGCT GTTGAAATCC
AAGCTGATGG ACGGCAAGGA CGAAAACCAC CCCGATGTAG CCAAGTTCCG CGATTATTTT
GACTATGACG AGCCGATTGG CCGCGTGCCT TCGCACCGCG CTTTGGCGGT GTTTCGTGGT
CGTGGTCTGG AGATACTCGA TGCCAAACTC GTGGTGTTTG AGCCAAATCA GGCGCCAGCC
ACCGTCGCAC CTGAACATGC AGCTATTAAA ACAAGAGTGG CCCCGGCCGT GTCGCTGGCC
GAGGGTCGCA TCGCTTTGAG GCTCGGTTGG AACCACCAGG GCCGCGCAGC CGATGATTTG
ATCCGCAAAT GTGTGGCCTG GACCTGGCGC GTCAAACTGA GCCTGTCCAC CGAGCGGGAT
TTGTTCACCC GCCTGCGCGA AGACGCCGAG CGCGTGGCGA TCAAGGTGTT TGCCGACAAC
CTGCGCGACC TGCTGCTGGC CGCGCCGGCC GGGCCGCGGG TGGTGCTGGG CCTGGACCCC
GGCATCCGCA CCGGCGTCAA GGTGGCGGTG GTGGACGCCA CCGGCAAACT GGTCGATACC
GCAACCGTCT ATCCGCACGA ACCGCGCAAG GATTGGGACG GCTCGCTGCA CATCCTGGCC
AGGCTGTGCG AGAAGCATGG CGTCAGCCTG ATCGCCATTG GCAACGGCAC CGCCAGCCGC
GAAACCGACA AGCTGGCTGC CGATCTGATC AAGCTCATGG CCAAATCATC CGAGCGCCTG
ATGGACAAAG TGGTGGTCAG TGAGGCGGGA GCCTCGGTCT ATTCGGCGAG CGAATTTGCC
TCGCAAGAGA TGCCCGACGT GGATGTGAGC CTGCGCGGCG CGGCCAGCAT CGCCCGGCGC
CTGCAAGACC CGCTGGCCGA GCTGGTCAAG ATCGACCCCA AATCCATCGG CGTGGGCCAG
TACCAGCACG ACGTGAACCA GGGCGAGCTG GCCAAAACGC TGGACGCGGT GGTGGAAGAC
TGCGTGAACT CGGTCGGCGT GGACCTGAAC ATGGCCAGTG TGCCGCTGCT CAGCCGCGTC
TCGGGTTTGA GCGGCAGTGT GGCCAAGGCG GTGGTGCGCT GGCGCGAGGC CAATGGTGCC
TTTGCCAACC GTCAGCAATT GTTGAAGGTA GCAGGCCTGG GGGCCAAAAC CTTTGAGCAA
AGCGCGGGCT TTTTGCGTAT TCGCGGGGGC GACAACCCGC TGGACATGAC CGGCGTGCAC
CCTGAGACCT ATGCCGTGGT GGAGCGGATC ATTGCCAAGA CCGGCCAGCC GGTGGCCGAC
TTGATGGGCC GCGCCGACAT GCTCAAGACC CTCAAGCCCG AGCTGTTTGC TAACGAGACA
TTTGGCGTGA TCACAGTCAA GGACATTCTG GGCGAGCTGG AAAAACCGGG CCGCGATCCG
CGACCGGACT TCAAGGTGGC ACGCTTCAAC GATGGCGTGG AAGACATCAA AGACCTGAAA
GAAGGCATGG TGCTGGAGGG CACGGTGAGC AACGTGGCCG CCTTCGGTGC CTTTGTTGAT
CTCGGAGTGC ATCAGGACGG GCTGGTGCAT GTGAGCCAGT TGAGTCACAA GTTTGTGACC
GATGCGCGCG AGATTGTCAA AACCGGCGAT ATCGTCAAGG TGCAGGTGGT CGAGGTTGAC
GTGGCACGCA AACGCATTGC CCTGACCATG AAGCTGGGCG CCGCCCCCAG CCGGCAGAGC
AGCGCCGGCG ACAACCGGTT TCAGGGCGTG GCCAACCACC AGCGCGCAGG GCGTGGCGCT
CAAGGCGCGG CGGCGTCGGC AAACCCGCCC GCAACCTCCA TGTCGTCGGC TTTTGCCAAA
CTCAAGGGCC TGGGTCGTTC CTGA
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| Protein sequence | MQKIIAQIAQ ELRVQNKQVQ AAVDLLDGGA SVPFIARYRK EATDGLDDIQ LRELEARLGY
LRELRDRLQT VIKAIDEQGK LTPELLAALV AAASKQELED LYLPFKLKRR TKGQLAREAG
LEPLADALFA NPELVPADEA QAYVIAMRPV VEGEDKQPDF STVPAVLDGV RDILSERWAE
NPAVVQDLRE WLWQEGLLKS KLMDGKDENH PDVAKFRDYF DYDEPIGRVP SHRALAVFRG
RGLEILDAKL VVFEPNQAPA TVAPEHAAIK TRVAPAVSLA EGRIALRLGW NHQGRAADDL
IRKCVAWTWR VKLSLSTERD LFTRLREDAE RVAIKVFADN LRDLLLAAPA GPRVVLGLDP
GIRTGVKVAV VDATGKLVDT ATVYPHEPRK DWDGSLHILA RLCEKHGVSL IAIGNGTASR
ETDKLAADLI KLMAKSSERL MDKVVVSEAG ASVYSASEFA SQEMPDVDVS LRGAASIARR
LQDPLAELVK IDPKSIGVGQ YQHDVNQGEL AKTLDAVVED CVNSVGVDLN MASVPLLSRV
SGLSGSVAKA VVRWREANGA FANRQQLLKV AGLGAKTFEQ SAGFLRIRGG DNPLDMTGVH
PETYAVVERI IAKTGQPVAD LMGRADMLKT LKPELFANET FGVITVKDIL GELEKPGRDP
RPDFKVARFN DGVEDIKDLK EGMVLEGTVS NVAAFGAFVD LGVHQDGLVH VSQLSHKFVT
DAREIVKTGD IVKVQVVEVD VARKRIALTM KLGAAPSRQS SAGDNRFQGV ANHQRAGRGA
QGAAASANPP ATSMSSAFAK LKGLGRS
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