| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2471 |
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| Symbol | thiE |
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| ID | 3960286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2717148 |
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| End bp | 2717807 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917290 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_523719 |
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| Protein GI | 89901248 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.232112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTAGGCG CCAGCACCTT GGCACACGAC GTGCGCTTGC AGGCACTGCG TTTGTATCTG
GTCACCGACC AGTTCTGCGC CGGTGGCCGT ACGCTGGCTG ATGTGGTGGC CGCGGCGGTG
CAAGGCGGCG TCACCTGTGT GCAGCTGCGC GAGAAGCAAC TCAATACCCG TGATTTTTTA
GCCCAAGCGC TGGCATTGAA GGATCTGCTC GCGCCGCATG GCATTCCACT CGTCATCAAT
GACCGGATTG ACGTTGCGCT GGCCTGTGGC GCGCAGGGTG TGCATCTGGG GCAGAGCGAT
ATGCCGGTGA CGCAGGCGCG CCGGCTGTTG CCACCCGAGG TCTTCATCGG CTGGTCGGTT
GAGACCCTGG AAGACGTTGC GCGCAGTGCC GAGCTGCCGG TGGATTATTT GGGCGTCAGC
CCGATCTTTG CCACACCCAC CAAAACCGAT ACCTTGCCAC CGTGGGGACT GGAGGGCTTG
CGCCAGGTCC GGCGGGCGAC AACCGTACCC TTGGTGGCGA TTGGGGGCAT TCATGTTGGC
AACGCGCGCG AGGTGCTATT GGCCGGTGCC GATGGGCTGG CGGTGGTGAG CGCGCTGTGT
GCGGCGCAAG ACCCCTGTGT GGCGGCGCTC AGGCTGAGAC AACTCATCGA CGCGGTCTGA
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| Protein sequence | MVGASTLAHD VRLQALRLYL VTDQFCAGGR TLADVVAAAV QGGVTCVQLR EKQLNTRDFL
AQALALKDLL APHGIPLVIN DRIDVALACG AQGVHLGQSD MPVTQARRLL PPEVFIGWSV
ETLEDVARSA ELPVDYLGVS PIFATPTKTD TLPPWGLEGL RQVRRATTVP LVAIGGIHVG
NAREVLLAGA DGLAVVSALC AAQDPCVAAL RLRQLIDAV
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