| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2467 |
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| Symbol | |
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| ID | 3960282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2714598 |
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| End bp | 2715536 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917286 |
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| Product | thiamine-phosphate diphosphorylase |
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| Protein accession | YP_523715 |
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| Protein GI | 89901244 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.371081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGC ATGACAGCAT GGTGCAGACC ATCGTCACGG CCCACGCCGA TCTCGCTTTG
GCGCCTGGCG CCGGCACATC GCAGCGCGCA GCCACCGCCA CCTTCACCTG TGATGCAGCG
GCTTACCGCG CCGCCAAAAG CGCCTGCCTG GCGCTCGGTT TCATTGAGGC GGATGCCGAA
TGCGTGGCAC TGGCCTGGCA AAACCAGACT GATCGCACCG GGCATTTTGA CGTGACGGTC
TGGCCCGACC AGCCTGAGGA TTTCAGTATG CAGGCCTGGC CGCGCCCAAC TGCGTTTGCG
GCTTGCCCGC GTCAATTGGG CCTGTACGCG GTCCTGCCCG ATGCGGTCTG GGTGGGGCGT
ATGGCACGCG CTGGCGTGTC CACCGTTCAA CTGCGCTTCA AATCCGATGA CACGGTGGTC
ATTGCCCGTG AAGTACGCGC TGCGGTTATG GCGGTCAAAG GCACGAATGC CCGGCTTTTT
ATCAACGACC ATTGGCAAGC CGCCATCGAT GCCGGGGCCT ATGGCGTGCA TCTGGGGCAG
GAGGACATGG TCGAAGCAGA CCTGGAAAAG ATCAGGGCGG CGGGCTTGCG TTTGGGTCTG
AGCAGTCACG GTTACGCCGA GATGCTGCGG GCAGATCACT ACAGTCCGAG CTACATCGCC
ATGGGTGCGG TGTTTGCCAC CACGCTCAAA CGCATGCTGA CACCACCGCA AGGCCTGGCA
CGACTGGGTG CTTATGCCCG GCTGATGCGT GACTACCCCA AAGTGGCGAT TGGGGGAATT
GACGCCAGCA AACTGCTGGA CGTGCTGAAC TGCGGCGTGG GATCGATTGC GGTGGTACGT
GCCCTGGTGG CCGCTGAAAA TCCTGAGGTC ATGGCCAATA GTCTGCAAGC CAAGATCAAC
GACAGGCTCT CGGCTATGGC GCCTGAGCCC GCGCTTTGA
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| Protein sequence | MSQHDSMVQT IVTAHADLAL APGAGTSQRA ATATFTCDAA AYRAAKSACL ALGFIEADAE
CVALAWQNQT DRTGHFDVTV WPDQPEDFSM QAWPRPTAFA ACPRQLGLYA VLPDAVWVGR
MARAGVSTVQ LRFKSDDTVV IAREVRAAVM AVKGTNARLF INDHWQAAID AGAYGVHLGQ
EDMVEADLEK IRAAGLRLGL SSHGYAEMLR ADHYSPSYIA MGAVFATTLK RMLTPPQGLA
RLGAYARLMR DYPKVAIGGI DASKLLDVLN CGVGSIAVVR ALVAAENPEV MANSLQAKIN
DRLSAMAPEP AL
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