| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2443 |
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| Symbol | |
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| ID | 3961055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2689645 |
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| End bp | 2691090 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917261 |
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| Product | major facilitator transporter |
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| Protein accession | YP_523691 |
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| Protein GI | 89901220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGTC TAGAACCCAC CTCACCTGCG CGACCTGCAA GTGAGAGCCA TCGTCAGAAC
GGCACCAACC AGGCCGCAGT TCTGACCATC ATCGTGACAA GCTACCTCAT GTTGGTGGTG
GACATCTCTA TCGTCCTGAC GGGATTGCCC AATATCCAGG CAGAACTGGG TTTCTCGCAT
GCGGAGCTTT CGTGGGTTCA GAACGCCTAC ACATTGGCCT TTGGCGGGTT CCTGCTGCTG
GGCGCGCGTG CCGGTGACAT CTTGGGTCGC CAGCGCATGT TCATTGCCGG ACTGACTCTT
TTTACAGCGG CTTCCATGGC TATCGGCCTT GCGCCATCAC CGACCTGGCT GCTGCTTGGG
CGTGCCATTC AGGGCGTGGG GGCCGCGATT CTGGCTCCCT CTACCCTTGC ATTGCTTTCC
ATCCACTTTG CGCAAGGTCA TGAGCGGACC CGTGCGCTTG CGCTGTATGC GGCGGCAGCC
GGAGTCGGGG CCAGTTTGGG CCTGGTTCTG GGCGGACTTG TTGCACAAGT GATCTCTTGG
CGTGTTGGTT TTTTTATCAA CCTCCCCATC GGCATCGCAC TGATACTCGG TGCAAAGCGC
TATCTTGTTG AAACTCCGTT GAAGTCAGGC CAGCTCGATC TGGCCGGAGC GGTAAGCTCC
ACGTTGGGCA TGAGTGTTCT TGTCTTTGGC ATCGTTCGTT CTGCCGAGTT GGGCTGGGGT
GACTCCGTTA CCACTGCAGC CCTGGTCGCT GGGTTGACGC TGCTGACGTT CTTCGTCATC
CATGAATCAG GTGCCAGCGA GCCCATTCTC CCCTTGCACC TGTTTGCCAA TCGTGAACGC
AGCGCGGCCT ACGCGGCCCG GATGTTGTTC TTGGGGGGCA TGGTGGGCTT CTGGTTCTTC
ACCACGCAAT TCCTGCAAGG GGTGTTGATG TACAAGCCCT TGCATGCTGG TCTTGCATTT
CTGCCAACGA CGATTCCCAA CTTTGTCGCG GCCGTGTTGG TACCTCGATT AACACGCAAG
TTCGGCAATG CAAGGCTGCT TGCAGTGGGA CTGGTCTTTG CCATAGTTGG CATGGCCTGG
ATTGCCCAAA TTTCGGAGCA TTCGCCTTAC ATCACGGGGA TCGCACTTCC GATGATTCTG
ATTGGCATGG GTCAAGGATT TGCTTTGGCG CCCCTAACGG TCGCTGCCTT GACAGATGTC
GCCAGTGAAG ATGCGGGTGC CGCCTCTGGT CTTGTGAACG TTGCTCACCA GTTGGGCGGA
TCCTTGGGGC TCAGCGTTCT GGTCGTGGTG TTTGCAACGG GTGGTTCAGT TGCGATGGAT
GCCTCAGGTC AATTGGCTCA CCACATTGCG AACACCTTCA CCGCAAGCGC TGTCATGTTG
TCGATCTCAT TGGTGCTTGT GCTCTCATTC ATCGTTCGCC CGCGAACGCA ACTTTGCCCC
CAGTAA
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| Protein sequence | MNSLEPTSPA RPASESHRQN GTNQAAVLTI IVTSYLMLVV DISIVLTGLP NIQAELGFSH
AELSWVQNAY TLAFGGFLLL GARAGDILGR QRMFIAGLTL FTAASMAIGL APSPTWLLLG
RAIQGVGAAI LAPSTLALLS IHFAQGHERT RALALYAAAA GVGASLGLVL GGLVAQVISW
RVGFFINLPI GIALILGAKR YLVETPLKSG QLDLAGAVSS TLGMSVLVFG IVRSAELGWG
DSVTTAALVA GLTLLTFFVI HESGASEPIL PLHLFANRER SAAYAARMLF LGGMVGFWFF
TTQFLQGVLM YKPLHAGLAF LPTTIPNFVA AVLVPRLTRK FGNARLLAVG LVFAIVGMAW
IAQISEHSPY ITGIALPMIL IGMGQGFALA PLTVAALTDV ASEDAGAASG LVNVAHQLGG
SLGLSVLVVV FATGGSVAMD ASGQLAHHIA NTFTASAVML SISLVLVLSF IVRPRTQLCP
Q
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