| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2438 |
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| Symbol | |
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| ID | 3961050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2684791 |
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| End bp | 2685765 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917256 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_523686 |
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| Protein GI | 89901215 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.473581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGA ATGAACTGCG TGCGATTGCC ACCTTCGCCA AGGCGGTGGA GTTGGGCAGC
CTGCGGCGTG CCGCCGTCGC GCAAGGTGTC TCTCCTCAGG CGGCCAGCCA GACACTGGCA
CAACTGGAAC AACACCTGGG CGTCCGATTG CTGCACCGCA CGACACGCAA TTTGGCGCTG
ACCGACGAGG GCCGGCAGTT GCTTGAGGCC ACTCAGCCCG CATTGGCAGC GCTGGAGCGG
GCACTACAGC GCGTTCGCGC GTCCAAGGAC GACATCGCCG GGCCCTTGCG TATCGTGGGT
CCCCAGTCCT CCTTTGTCCC CCTGCTATGG CCGGTGATCG ACGAGTTCTG CCGACAACAC
CCGGATGTAC AGCCCGATGT GCAACTCGAT GACAGCATTG GAAACTGGGT GCAGGACCGA
GTGGATGTGG GGTTTCGCAT TGGCGCACCA CCCCAGGACG GATTGATCGC GCGGCGGCTG
TTCCCGGTGC AACTGATCAT CTGTGCAGCA CCGGATTACC TGGCCCGCCA CGGCGCGCCA
AGGACATTGG AAGAACTGGC CTCACACCGC TGCAGCGTTT TTCGCCATCC TGGCACAGGG
CAGGTACTGC CGTGGTATTT GCAGGTTGAT GGTGAAGTCG TCCATCGCGA TATGCCCCTG
GCCCTTTCGA CCAACGATAC TGAGTTGGAA CTTCAAGCTG TGCTGTCCGG TCAGGTCATT
GCTCAGCTGT CTGGCATGTC TGCCGCACCG CTCATTCGCG AAGGGCGTTT GGTCCCTATA
CTCACGCAAC ATATGACGGA TCACATGAGC GTTTATGTCT ACTACGGCAG CCGTACCTCG
CAGCCGGCTC GGGTGCGCGC TTTTATCGAT TTGGCGGTGG AGCGTTTGCA TGGGGGTGCT
GCGGTCATGC TGTCAAAAAG GGAACTCACT TCGGCTGAGG CGGCTGGGCG GAAATTGGGC
AACCACCACC GTTGA
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| Protein sequence | MPMNELRAIA TFAKAVELGS LRRAAVAQGV SPQAASQTLA QLEQHLGVRL LHRTTRNLAL
TDEGRQLLEA TQPALAALER ALQRVRASKD DIAGPLRIVG PQSSFVPLLW PVIDEFCRQH
PDVQPDVQLD DSIGNWVQDR VDVGFRIGAP PQDGLIARRL FPVQLIICAA PDYLARHGAP
RTLEELASHR CSVFRHPGTG QVLPWYLQVD GEVVHRDMPL ALSTNDTELE LQAVLSGQVI
AQLSGMSAAP LIREGRLVPI LTQHMTDHMS VYVYYGSRTS QPARVRAFID LAVERLHGGA
AVMLSKRELT SAEAAGRKLG NHHR
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