Gene Rfer_2414 details

Gene Information

• Locus tag: Rfer_2414
• ID: 3961241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2656842
• End bp: 2658860
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637917232
• Product: peptidase U32
• Protein accession: YP_523662
• Protein GI: 89901191
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0826] Collagenase and related proteases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.215421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTGC TTGACCATCA ACTCGAACTG TTAGCCCCGG CGCGTGACGC CGACATTGGC 
ATCGAAGCCG TCAACCACGG TGCCGACGCC GTTTACATCG GTGGTCCGTC CTTTGGCGCG 
CGCGCCAATG CGGACAACAG CGTCACCGAG ATCGCCCGGC TGACGCGCCA TGCCCACCGC 
TTCAACAGCC GTGTCTTCGT CACGCTCAAC ACCGTGCTGC GCGATGACGA GCTGGAGCCA 
TCGCGCAAGC TGGTTTGGCA ACTGTATGAC GCGGGAGTGG ATGCCCTGAT CATCCAGGAC 
ATGGGCTTGC TGCAGATCGA CCTGCCGCCG ATCCAGCTCC ATGCCAGCAC CCAGTGCGAC 
ATTCGCACAC CAGAGAAAGC CCGTTTTTTG CAGGACGTGG GCCTGTCGCA AATTGTGCTG 
GCGCGCGAAC TCTCCCTGCC GCAAATCCTG GCCATCCGTG CCGCGACCGA TCCCGAGCGC 
TGCACGCTGG AGTTTTTTGT GCATGGCGCA CTGTGCGTGG CCTACAGCGG CCAGTGCTAC 
ATCAGCGCCG CCCACACCGG GCGCAGTGCC AACCGGGGCG AGTGCAACCA GGCCTGCCGC 
CTGCCCTATC AGGTGGTTGA CGATAAAGGT CGCTTTGTGG CGCACGACAA ACACGTGCTG 
TCCATGAAAG ACAACAACCA GAGCGACAAC CTGGCGGCTC TGGTGGACTC GGGGATTCGC 
AGCTTCAAGA TTGAAGGCCG CTACAAGGAC ATGGGCTACG TGAAAAATAT CACGGCCCAT 
TACCGCAAGC GACTGGACGC CCTGATTGAA GAACGCCAGA CCTCCAAGCA GCCGCTGGCG 
CGCGCATCCA GCGGCAGCAC CACATTCAGC TTTACGCCTG ACCCGAACCA GAACTTCAAC 
CGCGAGTTCA CCGATTATTT TGTGCGAGGC CGTCAGGCGG ACATTGGCGC GTTTGACACG 
CCCAAGAACC CCGGCCAGCC CATTGGTTTT GTGACCCAGG TCGGCCCCAA CTGGGTGGAA 
CTGGCTGTGA GCGATCCGGC GCAGGCCTTG CACAACGGCG ACGGTCTTTG TTACTACGAC 
TTGCAAAAAG AGCTGGTCGG CCTGGCCATC AACCGGGCTG AAAGCCTCAA CGCTGCCAAG 
GGCCGCTGGC GCGTGTTTCC CAAAGACGCC TTGAGTGATC TGAAGGACCT GCGCAAAGGC 
GTGGAGGTCA ACCGCAACCG CGATACCGAG TGGGTGCGCG GCCTGGAGAA AAAATCAAGC 
GACCGGCGCA TTGGCGTTTG GCTACATCTG GCAGATACGC CACAGGGCCT GGCCTTGAGC 
CTGACCGACG AAGACGGCGT GACGGCCACG GCCCACGCCA ACCTGGTCCG CACACTGGCC 
AAGGACAGGG AAGTCGCCAA CGCGAGCCTG CGTGAGCACC TCGGCAAAAT GGGCAACAGC 
ATTTTTACGG CGCTGGCGGT GCAGGTGGAA TTTTCACAAG CCTGGTTTGT GCCCCCGTCG 
GTCCTCAACC CGTTGCGCCG GGACGCTTTG GAGGCACTGG AAACCGCACG CACCAAGGCA 
TTCAGACGAT TGCCACGCGC CGCTGCCGTG GAGCCGCCAG CACCCTACCC TGAAGACACA 
CTGAGCTATC TGGCCAATGT TTTCAACCAG GCCTCCCATG CCTTTTACGC CCGCCACGGC 
GTCAAGGTGG TTGCGCCCGC TTTCGAAGCG GCGCAAGAAC TGGGTGAAGT CAGCCTGATG 
ATCACCAAGC ACTGCGTGCG TTTTTCATTG AGCTTGTGCC CCAAACAGGC CAAGGGCGTG 
ATCGGCGTGC AGGGCACGGT GAAGGCCGAG CCATTACAAC TCATCAACGG ACGCGAGAAA 
CTCACCCTGC GCTTTGACTG CAAGCCGTGT GAAATGCATG TCATGGGCAC GATCAAGAAT 
TCGGTATTGC AACAAACCAT CAAGTCCCTC GCGCCAGCGC CGGGTGAAGT GCCCGTCAAC 
TTCTTTCCCA GGCGCCCCCT GAACACCTCG GTCGGTTGA 

 

Protein sequence

MSLLDHQLEL LAPARDADIG IEAVNHGADA VYIGGPSFGA RANADNSVTE IARLTRHAHR 
FNSRVFVTLN TVLRDDELEP SRKLVWQLYD AGVDALIIQD MGLLQIDLPP IQLHASTQCD 
IRTPEKARFL QDVGLSQIVL ARELSLPQIL AIRAATDPER CTLEFFVHGA LCVAYSGQCY 
ISAAHTGRSA NRGECNQACR LPYQVVDDKG RFVAHDKHVL SMKDNNQSDN LAALVDSGIR 
SFKIEGRYKD MGYVKNITAH YRKRLDALIE ERQTSKQPLA RASSGSTTFS FTPDPNQNFN 
REFTDYFVRG RQADIGAFDT PKNPGQPIGF VTQVGPNWVE LAVSDPAQAL HNGDGLCYYD 
LQKELVGLAI NRAESLNAAK GRWRVFPKDA LSDLKDLRKG VEVNRNRDTE WVRGLEKKSS 
DRRIGVWLHL ADTPQGLALS LTDEDGVTAT AHANLVRTLA KDREVANASL REHLGKMGNS 
IFTALAVQVE FSQAWFVPPS VLNPLRRDAL EALETARTKA FRRLPRAAAV EPPAPYPEDT 
LSYLANVFNQ ASHAFYARHG VKVVAPAFEA AQELGEVSLM ITKHCVRFSL SLCPKQAKGV 
IGVQGTVKAE PLQLINGREK LTLRFDCKPC EMHVMGTIKN SVLQQTIKSL APAPGEVPVN 
FFPRRPLNTS VG