| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2393 |
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| Symbol | |
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| ID | 3962063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2636240 |
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| End bp | 2637868 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917211 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_523641 |
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| Protein GI | 89901170 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0010153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGGT TGATGCAAAA CCACCAGTTG TTGATTTCGT CGCTGATCGA GTTTGCGCAG
CGCCACCATG GCGAGGGCGA AATCGTGTCG CGACGGGTGG AAGGCGATAT TCATCGCTGC
ACCTATAAGG ATATTGCGTC GCGTTCACGC CAGGTTGCCA ACGCCCTGGA TGGGCTGAAG
CTGCCCTTCA GCGACCGGGT GGCCACACTC GCATGGAACG GTTACCGTCA CCTGGAACTG
TATTTCGGCG TGAGTGGTTC GGGTCGGGTG CTGCATACGC TCAATCCGCG CCTGCACCCG
GACCAGATTG TCTGGATTGC CAACCACGCA GAAGATTCCG TGCTGTGTTT TGACATGAGC
TTTTTGCCCA TTGTCAAAGC CATCCACGGC CGTTGCACCA CCATCAAACA TTTTGTGGCG
ATGTGTGATG CCGACAAACT ACCGGCCGAC AGCGGCATTC CCGGCCTGCT CTGCTATGAA
GCATGGATTG GCGCCCAATC GAGCAGCTAC AAATGGCCTG CCTTTGATGA AAACTCGGCG
TCCAGCATGT GCTACACCAG CGGCACCACC GGCAACCCCA AAGCAGCCCT GTACAGCCAT
CGATCCACCA TGTTGCACGC GTTTGCCGGC GCTTTGCCAG ACGCCTTGAG TATGAGCGCG
CGTGACACGG TGTTGCCAGT GGTGCCCATG TTCCACGTCA ATGCCTGGGG CCTGCCGTAT
TCAGCGGCGA TGACGGGGGC CAAACTGGTG TTTCCGGGAC CAGCCATGGA TGGAAAATCC
ATCTTTGAAT TGATCGAGAA CGAACGCGTG TCGTTTGCGG CCGGTGTTCC CACCGTGTGG
CAGATGATGC TCAGTCACAT GCAGGCGGGC GGTTTGCGTT TCAGCACACT CAAGCGCACT
GTCATTGGTG GCTCGGCCTG CCCGCCGGCC ATGATCACGG CGTTCAATGA CGTCTATGGT
GTGGAGGTAC TGCATGCCTG GGGCATGACG GAAATGTCGC CCCTGGGCAC GGTTTGCACC
CTCAAGAACA AGCATCTGGC GATGACGCCT GAGGAAAAAA TGAAGGTCCG GCTCAAACAG
GGACGCGGCA TTTTTGGCGT GGACATGAAA ATTGTGGATG GCAACGGGGA TGAATTGCCT
TGGGATGGCA AGGCGTACGG TGACCTGCTG GTCAAGGGCC CCTGGATCAT CAGTGACTAT
TTCAAAGGGG AGGGCGGCTC GCCACTGGTA GACGGCTGGT TCCCGACCGG TGACGTCGCC
ACCATTGATG CCGATGGCTA CATGCAGATC ACCGACCGCA GCAAAGACGT TATCAAGTCC
GGCGGCGAGT GGATCAGTTC CATTGATGTG GAGAACGTTG CCATGGCGCA CCCGGCCGTG
GCGATGGCCG CTTGCATCGG CATGAAGCAT CCCAAGTGGG ATGAGCGGCC CATCATCGCC
GTGATGAAGA AGCCGGGCGC GGAGGTCTCG CGTGACGAAC TTCTTGCGTT TTATGAGGGC
AAATGCGCCA AATGGCAGAT ACCGGACGAC GTCGTGTTTG TTGACGCGAT TCCGCTCGGT
GGTACCGGCA AGATGCAGAA GAGCAAACTG CGTGAGCTGC TCAAGGATTA CCAGCTGCCG
GATGCTTGA
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| Protein sequence | MLGLMQNHQL LISSLIEFAQ RHHGEGEIVS RRVEGDIHRC TYKDIASRSR QVANALDGLK
LPFSDRVATL AWNGYRHLEL YFGVSGSGRV LHTLNPRLHP DQIVWIANHA EDSVLCFDMS
FLPIVKAIHG RCTTIKHFVA MCDADKLPAD SGIPGLLCYE AWIGAQSSSY KWPAFDENSA
SSMCYTSGTT GNPKAALYSH RSTMLHAFAG ALPDALSMSA RDTVLPVVPM FHVNAWGLPY
SAAMTGAKLV FPGPAMDGKS IFELIENERV SFAAGVPTVW QMMLSHMQAG GLRFSTLKRT
VIGGSACPPA MITAFNDVYG VEVLHAWGMT EMSPLGTVCT LKNKHLAMTP EEKMKVRLKQ
GRGIFGVDMK IVDGNGDELP WDGKAYGDLL VKGPWIISDY FKGEGGSPLV DGWFPTGDVA
TIDADGYMQI TDRSKDVIKS GGEWISSIDV ENVAMAHPAV AMAACIGMKH PKWDERPIIA
VMKKPGAEVS RDELLAFYEG KCAKWQIPDD VVFVDAIPLG GTGKMQKSKL RELLKDYQLP
DA
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