| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2386 |
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| Symbol | |
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| ID | 3962837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2627546 |
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| End bp | 2629645 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917204 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_523634 |
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| Protein GI | 89901163 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.256587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTG ACTACAAAGT GCATGGCGAC ATCGCCGTAC TGACGCTCAA TAACCCACCC
GTCAATGGAC TGGGCTATGC CACACGATTG GCACTCACCG ATGGTCTGGC CAAGGCCGAT
GCCGACGCTT CCGTGAAAGC CATCGTCATC ACCGGCGCGG GTAAAGCGTT CTCGGGCGGC
GCCGACATCA AGGAGTTTGG CAGCCCCACG GCCTTGCAGG AACCCAACCT GCTCAGCGTG
ATTCTGATGA TTGAAAATTC GAGCAAACCG GTCATTGCCG CCATTCACTC GGTCTGCATG
GGCGGCGGGC TGGAACTGGC CCTGGGTTGT CATTACCGTA TTGCCGCGCC TGGGTGTAGC
GTTGCGCTGC CCGAGGTTAA ATTGGGCTTG GTGCCGGGTG CTGGCGGTAC GCAGCGCCTG
CCGCGTGCGC TCGGGGTCGA GCCGGCATTG AACATGATTG TCAGTGGTGA GCCAGTCAAA
AGCGAGTTGC TGGCGATGCT GCCGGGCCAG CAGTTGTTCA ACAAAATGGC CACCTCGAAC
GAATCCCTGG CCGAAGAGGC TCTGCTCTAT GCGCGCTCGG TCGCCGAAAC GCGGCCGCTG
CCACTGGTGC GCAACCTGCC TTGCAAACAC CCGCAAGGTG ATGCTTATTT CCAGTTCGCC
CGTAATATGG TGGGCGGCAT GTCCAAAAAT TTCCCGGCGC CGCTCAAATG CGTGGATGTC
GTTCAAGCAG CCACCACCAA GAAGTTTGAC GACGGTATGC TGTTCGAGCG CGAGAGCTTC
ATCAACCTGA TGTGGACTCC CGAGTGTCGC GCCCTGCGGC ACATCTTCAT GGCCCAGCGT
GCCGCCTCCA AGATCCCGGA TGTGTCCGCG GACACGCCGC AACGCGCGAT CAACTCAGTA
GCGATCATTG GTGCCGGCAC GATGGGCGGC GGTATCTCGA TGAATTTCCT CAACGCCGGC
ATTGCGGTGA AGATACTGGA AATGAAGCAG GAGGCGCTGG ACCGTGGTAT TGCCACCATT
CGCAAGAATT ACGAAGCCCA GGTCAAAAAA GGCAAACTCA AACAGGACAA ATACGAGCAG
CGCATGAGCC TGCTCAGTAC CACGTTGAGC TACGACGACC TCAAAGACGC GGACATGGTC
ATTGAAGCCG TGTTTGAAGA AATTGGCGTG AAAGAGGCCG TGTTCAAGGA ACTTGATCGG
GTGATGAAGC CCGGCGCGAT CCTGGCGTCC AACACCTCCA CCCTGGATGT CAACAAGATT
GCTTCGTTCA CCAAGCGCCC GCAGGACGTG GTCGGCATGC ACTTCTTCAG CCCGGCCAAT
GTGATGAAGC TGCTGGAAGT GATACGCGGT GAGAAAACGG CCAAAGACGT GCTGGCCACC
GTGATGGCGC TGGCGAAAAA GATCAAGAAG ACCGCCGTGG TATCGGGCGT GTGTGATGGT
TTCATTGGCA ACCGCATGAT CGAGCAATAT GGCCGCCAGG GTGGCTTTCT GCTGGACGAA
GGCTGCACGC CAGCTCAAGT CGACAAGGCG GTGGAAAAAT TCGGCTTCGC CATGGGCCCG
TTCCGCATGG GTGACCTGGC GGGCAACGAC ATTGGCTGGG CCATCCGCAA GCGCCGCTAC
CTTGAAAAAC CCGACATGAA GTACAGCAAG ACCGCTGATT TGTTGTGCGA AAAAGGACGC
TTTGGCCAGA AGACCGGTGC GGGCTGGTAT GACTATGTGG CTGGCAAGCG CGATGCCATT
CCGAATGCCG AAGTCGTCAA GATGATTGAA GACCATCGCG CCGCACTGGG CATCACACCG
CGCAAGATTT CGGACGAAGA GATCGTGCAG CGTCTGGTCT ATTCGCTGGT CAATGAGGCC
GCTCACATTC TGGAAGAAGG CATTGCCTCC AAAGCCAGCG ACATCGACAT GGTGTATCTG
ATGGGCTACG GTTTCCCCAT TTGGCGCGGC GGCCCGATGA ATTATGCCGA TGAAGTGGGT
TTGTTCAATG TGGTGCAAGC CATGCACCGC TTTGCCAAGA ACCCGCTCGA CGATGCCAAG
TTTTGGCAGC CTGCTCCCTT GCTGGCCAAA CTGGCGGCTG AAGGCAAAAC ATTCAATTGA
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| Protein sequence | MTADYKVHGD IAVLTLNNPP VNGLGYATRL ALTDGLAKAD ADASVKAIVI TGAGKAFSGG
ADIKEFGSPT ALQEPNLLSV ILMIENSSKP VIAAIHSVCM GGGLELALGC HYRIAAPGCS
VALPEVKLGL VPGAGGTQRL PRALGVEPAL NMIVSGEPVK SELLAMLPGQ QLFNKMATSN
ESLAEEALLY ARSVAETRPL PLVRNLPCKH PQGDAYFQFA RNMVGGMSKN FPAPLKCVDV
VQAATTKKFD DGMLFERESF INLMWTPECR ALRHIFMAQR AASKIPDVSA DTPQRAINSV
AIIGAGTMGG GISMNFLNAG IAVKILEMKQ EALDRGIATI RKNYEAQVKK GKLKQDKYEQ
RMSLLSTTLS YDDLKDADMV IEAVFEEIGV KEAVFKELDR VMKPGAILAS NTSTLDVNKI
ASFTKRPQDV VGMHFFSPAN VMKLLEVIRG EKTAKDVLAT VMALAKKIKK TAVVSGVCDG
FIGNRMIEQY GRQGGFLLDE GCTPAQVDKA VEKFGFAMGP FRMGDLAGND IGWAIRKRRY
LEKPDMKYSK TADLLCEKGR FGQKTGAGWY DYVAGKRDAI PNAEVVKMIE DHRAALGITP
RKISDEEIVQ RLVYSLVNEA AHILEEGIAS KASDIDMVYL MGYGFPIWRG GPMNYADEVG
LFNVVQAMHR FAKNPLDDAK FWQPAPLLAK LAAEGKTFN
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