| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2376 |
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| Symbol | |
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| ID | 3962826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2615474 |
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| End bp | 2618446 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917193 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_523624 |
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| Protein GI | 89901153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.171381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTT CGCTGGAACT TGCCAGCGAA ACAGCCAAAG ACACCATGAA CGACGAACTG
CAACAACCCG GCCTCAACAG CCTGTCCAAA TCTTTTGAGC CCGCCGCCCT GGAAGCCCAT
TGGGGACCGG AATGGGAACG CCGGGAGTAC GCGCACGCCG GCTACCGGGG CAAGGGCGTG
CCGAAAGACG GCGCCGAGGC CTTCGCCATC CAGCTGCCGC CGCCCAATGT CACCGGCACG
TTGCACATGG GGCACGCGTT CAACCAAACC ATCATGGACT CGCTGACGCG CTACCACCGC
ATGCGTGGCG ACAACACGGT GTGGATTCCG GGCACCGACC ATGCCGGCAT TGCCACGCAA
ATCGTGGTGG AGCGGCAGTT GCAGGACCAA AAGGTCAGCC GCCACGACTT GGGACGAAAA
AATTTCGTCT CCAAGGTCTG GGAATGGAAA GAAAAATCCG GCAACACCAT CACCACCCAA
ATGCGCCGCA TGGGTGACAG CGTGGACTGG AGCCGCGAAT ACTTCACCAT GGACCCGAAA
CTGTCCAAAA CCGTGACCGA GACCTTTGTC CAGCTTTATG AGCAAGGCTT GATCTACCGC
GGCAAACGGC TGGTGAACTG GGACCCGGTG CTGCAAAGCG CGGTCAGCGA TCTGGAAGTG
GAAAGCGAAG AGGAAGACGG CTTTCTGTGG CACATCCTGT ATCCCTTCGC CGACGGCCCG
CAATTGGTCA ACGGTGAACT GGCGCCCGGC CTGGTGGTTG CCACCACGCG CCCGGAAACC
ATGCTCGGTG ACGTGGCGGC GATGGTGCAC CCTGACGACG AGCGCTACCA GCACCTGATC
GGCAAACACG TCACCCTGCC CTTGTGCGGC CGCACCATTC CCGTGATTGC CGACGACTAC
GTGGACAAAG CCTTCGGCAC CGGCGTGGTG AAGGTCACGC CCGCACATGA CCAGAACGAT
TACGCCGTGG GCCAGCGCCA CAAGCTGCCG ATGATTTGTG TGCTGACACT GGATGCCAAG
ATTGACGCGG TGGCGCCAGC CGCCTACGTC GGCATGGATC GCTTTGTGGC GCGCAAGAAA
ATTGTCAAAG ACCTGGAAGC TTTGGGCTTG CTGATTGAGG TCAAGAAACA CAAACTCATG
GTGCCGCGCT GCGCCCGCAC CGGCCAGATC ATCGAACCCA TGCTGACCGA CCAATGGTTT
GTCGCCATGA GCAAGGTCAG CCCGATTGAC CCTACGGCCA AATCCATCGC CCAAAAAGCC
ATTGACGCCG TGCAGTCCGG CGACGTCAAG TTCGTGCCGG AGAACTGGGT CAACACCTAC
AACCAGTGGA TGAACAACAT CCAGGACTGG TGCATCAGCC GCCAGCTCTG GTGGGGTCAT
CAGATTCCAG CCTGGTACGA CGAAAACGGC AAGGTCTACG TGGCCCGCAA CGAGGCCGAG
GCACAAGCCC AGGCCCCGGG TAAAACCCTG CGCCGTGACG AAGACGTGCT CGACACCTGG
TACTCCTCCG CCCTGGTGCC GTTTTCCACC ATGGGCTGGC CGGAAAAGAC GCAAGACTTC
GACCTCTACC TGCCCTCCTC CGTGCTGGTC ACCGGCTACG ACATCATCTT CTTCTGGGTC
GCCCGGATGA TCATGATGAC CACCCATTTC ACCGGCCAGG TGCCGTTCAA ACACGTCTAC
ATCCACGGCC TGGTGCGCGA TGCGCAAGGC AAGAAGATGA GCAAGTCCGA GGGCAATGTG
CTCGACCCGG TCGACTTGAT TGACGGTATT GCACTGCCCG AATTGCTGCT CAAACGCTCC
GAAGGTCTGC GCAAGCCCGA AACGGCGCCT GCGGTGCGCA AGAACACCGA GAAAGAATTT
CCGGCCGGCA TCCCGGCCTT TGGCGCCGAT GCGCTGCGCT TCACCTTTGC CTCGCTGGCC
TCGCTGGGCC GCAGCATCAA TTTCGATGCC AAGCGCTGCG AGGGCTACCG CAATTTCTGC
AACAAGCTGT GGAACGCCAG CCGTTTTGTG CTGATGAACT GCGAAGGCCA GGATTGCGGC
CTGAACGAGC ACACGAAAGA AGAATGCGCC GTCGGCGGTG CTGCGCACGG CTACCTGGAG
TTCAGCCCGG CCGATCGCTG GATCGTCTCG CTACTGCAGC GCGCCGAAGC CGAGGTCGCC
AAAGGTTTTG AAGAATACCG GCTGGACAAC GTCGCCAGCA CCATTTACGA CTTTGTCTGG
AACGAGTTCT GCGACTGGTA TCTGGAAATC GCCAAGGTGC AGATTCAACA AGGCAAAGAC
AACCAGGACC CGCAGACGGG TCTGGCGCAA CAGCGTGCCA CGCGCCGCAC CCTGATTCGC
ACTTTGGAAA CCATCCTGCG CCTGGCGCAC CCCGTGATTC CCTTTGTGAC CGAGGAGCTA
TGGCAAAAAG TGGCACCGGT CGCCGGCCGG GCCGGCGAAT CGGTGTCGAT CGCGGTTTAC
CCTCAGGCAC AGCCCGAGCG CATTGATGAA GCGGCGCTGG CGCATGTGGG CAAACTCAAA
CAACTTGTCG ATGCCTGCCG CAATCTGCGC GGTGAGATGA GCGTGTCACC CGCCACCCGG
CTACCCTTGT TCGTGATCGC CAACCAGGCA GATGAAGCCG CCTTTTTGAC GCAATCGGCG
CCGGTCCTCA AGGCGCTGGC CAAGCTGAAC GAGGTTCGCG TGTTTGACGA CGAAACCGCC
TGGGCCGCCG CCGCTCAAGC CGCGCCCGTG GCTGTGGTGG GTGAGGCACG CATTTGCCTG
TTCATGGCCA TTGACGTCGC CGCCGAAAAG ACCCGTCTGG GTAAGGAGGC AGCGCGTCTG
GAAGGTGAAA TTGCCAAGAC CGAAGGCAAG TTGAGCAACG AGGCGTTCGT CGCCCGCGCC
CCGGCCGCCG TCATCGAACA AGAACGCAAG CGCATGACTG ATTTTGGTGC GACTCTGGCC
AAAATAAAAG ACCAACTCGC GCGCCTGGGC TAG
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| Protein sequence | MSRSLELASE TAKDTMNDEL QQPGLNSLSK SFEPAALEAH WGPEWERREY AHAGYRGKGV
PKDGAEAFAI QLPPPNVTGT LHMGHAFNQT IMDSLTRYHR MRGDNTVWIP GTDHAGIATQ
IVVERQLQDQ KVSRHDLGRK NFVSKVWEWK EKSGNTITTQ MRRMGDSVDW SREYFTMDPK
LSKTVTETFV QLYEQGLIYR GKRLVNWDPV LQSAVSDLEV ESEEEDGFLW HILYPFADGP
QLVNGELAPG LVVATTRPET MLGDVAAMVH PDDERYQHLI GKHVTLPLCG RTIPVIADDY
VDKAFGTGVV KVTPAHDQND YAVGQRHKLP MICVLTLDAK IDAVAPAAYV GMDRFVARKK
IVKDLEALGL LIEVKKHKLM VPRCARTGQI IEPMLTDQWF VAMSKVSPID PTAKSIAQKA
IDAVQSGDVK FVPENWVNTY NQWMNNIQDW CISRQLWWGH QIPAWYDENG KVYVARNEAE
AQAQAPGKTL RRDEDVLDTW YSSALVPFST MGWPEKTQDF DLYLPSSVLV TGYDIIFFWV
ARMIMMTTHF TGQVPFKHVY IHGLVRDAQG KKMSKSEGNV LDPVDLIDGI ALPELLLKRS
EGLRKPETAP AVRKNTEKEF PAGIPAFGAD ALRFTFASLA SLGRSINFDA KRCEGYRNFC
NKLWNASRFV LMNCEGQDCG LNEHTKEECA VGGAAHGYLE FSPADRWIVS LLQRAEAEVA
KGFEEYRLDN VASTIYDFVW NEFCDWYLEI AKVQIQQGKD NQDPQTGLAQ QRATRRTLIR
TLETILRLAH PVIPFVTEEL WQKVAPVAGR AGESVSIAVY PQAQPERIDE AALAHVGKLK
QLVDACRNLR GEMSVSPATR LPLFVIANQA DEAAFLTQSA PVLKALAKLN EVRVFDDETA
WAAAAQAAPV AVVGEARICL FMAIDVAAEK TRLGKEAARL EGEIAKTEGK LSNEAFVARA
PAAVIEQERK RMTDFGATLA KIKDQLARLG
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