| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2339 |
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| Symbol | |
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| ID | 3962672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2571696 |
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| End bp | 2572553 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917155 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_523587 |
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| Protein GI | 89901116 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCA TGTCAAATGC TAGCGCCTTC GGCTCTGTCC AGGCGCTGAA AAAAACGAGA
AAAATGCCGG TTATTTTTCT GGGCCATGGC AGCCCCATGA ATGCCATTGA AGACAACGAC
TATCGTCGCA GCTGGCAATC GCTGGGGGCC AAATTTGGTG CGCAGTGGCC CATGCCACAG
CTCATTTTGT GTATCTCTGC CCATTGGCTC ACAAACGGCT GGTGGCTGAC CGCCATGACA
CAGCCCAAAA CGATTCACGA TTTTGGCGGT TTCCCGCCAG CGCTTTTCGA TCAGCAGTAC
CCGGCTCCGG GTTTTCCGCA AGCCGCGCAG GAAATCAGTC AGGGCCTGCG TCAGCCGGGC
AGCGCCAAGC CCTTATCACT CGATTTTCAG GAATGGGGCC TTGACCATGG CGCATGGTCC
GTGCTCAAGC CGATGTTTCC TGCTGCCGAT GTGCCGGTCA TTCAACTCAG CATGGATTAC
AGCCGCCCCC CTGCAGAGCA CTATGCGCTG GGCCAGCAGC TCAAAGGTTT GCGCGAGCTT
GGTGTGCTGA TTGTGGGCAG CGGCAATATG GTGCACAACT TGCGCACCCT GCAGATGGGA
GCCGGGCCGG ACCAGGCGTA TGACTGGGCG CTTGAATTCG ACCAAACCAT TGCCGACTAT
CTGCAGAACG GGAATCTGGA CGCGCTACAG AATTTCCAGA CGCTCGGGGC GGTTGCAAAA
CAGTCACATC CCACACATGA GCATTTTTTG CCCCTGCTTT ATGCGGCCGG GGCGGTCGAT
GCCAGCGAAA CGCCGCAGTT TTTCAATACC AGTTTTCAGG CTGCATCGAT CTCGATGCGT
TCGGTCATCT GGGCCTGA
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| Protein sequence | MTVMSNASAF GSVQALKKTR KMPVIFLGHG SPMNAIEDND YRRSWQSLGA KFGAQWPMPQ
LILCISAHWL TNGWWLTAMT QPKTIHDFGG FPPALFDQQY PAPGFPQAAQ EISQGLRQPG
SAKPLSLDFQ EWGLDHGAWS VLKPMFPAAD VPVIQLSMDY SRPPAEHYAL GQQLKGLREL
GVLIVGSGNM VHNLRTLQMG AGPDQAYDWA LEFDQTIADY LQNGNLDALQ NFQTLGAVAK
QSHPTHEHFL PLLYAAGAVD ASETPQFFNT SFQAASISMR SVIWA
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