Gene Rfer_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2338 
Symbol 
ID3962671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2570346 
End bp2571695 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content60% 
IMG OID637917154 
Producthypothetical protein 
Protein accessionYP_523586 
Protein GI89901115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT TCGCGGTGGC TTTGGCCAGC GTACTTGGGC TGGCAGCCGG TAACGCCCTG 
GCCTGGAGCA ATCACAGCTT TGCCGCCTAC CGCACTTTTG AAAATATGCC CGAAGTGGCG
AAGGCAGCGG TGGTCACGGT CGAGCCGCTG GAAGCCTTCC TGAAGGCGCA GGAGAAATCC
ATTGAAACCC TGCTGCTCAG CCAGGAAACC TGGGCACAAA CCCACTTGGA CGTCTACCCA
CCCCGTCCGG CAGCACTGGT TTTCAGGGCC AACCCAACGC GAACCGACGA GGCCCGGCGA
CTGGCATTTC TGATGGCTTT GCGGGTGGCG CCCAACAGCA AATTGGCACT CTACATTCAA
CCCGATCCCT GGAGCCCGCG CCCGGACGCT GCCACGCTGC TGGCACACGC TAGCGTCAAC
ACGCTGCCCG AGCAACCCAA CTCAAACTAC CGTTTTGTCG GCATCAAGGC GGGCGACAAG
GTCTCGCCAC TGAGCGTGCT GGCCTCGGCC ACCGATGAGC CGGACTATGG TTTGGACATC
AATCTGTGGG CCGACAGCCC GTCGGACTGG GGCAAGGTCT ACGGCTTTGG CGCCTTGCCG
TTTGGCAACC CCGCGCTGTA CTTCTCGACC CAGGCGCCGT TTCACATGGG CTTCTACCAC
GAAGACCGCG TTATTTACCT GGCGGCGCCC TTTATCAAGA AGACTTTTCC TCTGCTTCGT
ATCCACCAGT ACAGCAGCCT GGCCGCGCTG GCTTTCCGAA CCAGCCACCC TTACTGGGGC
TGGCGCTTCA CCGGGCTGGC GCTGCACTAT GTGCAGGATC TGACCCAACC GTATCACGCC
AGCCTGTCGC CCGGCAATTC ATCCCTGAAA CTGATCGGCA TCAACCTGCT GGCGATGGCC
GGGCTGCCCA AAATGAAAGA CGAAATGATT GTGCTGCTGT CCAATCGCCA TCTCGCGCTG
GAAAAATACC AGAATCAGCT CATTTATAAC GCCTCGCTGG CCAGGCAGGA GACCAGCATC
GAAAAGTCAC TGCGCAACAG CGACAAAGAC GCCAGCTACC CGGCCTGGTC CGACCTGTAT
GCACGCGATG TCGTGAGTCG CCAGTCTCAT GCCCTTGGTA CCCGGCTGAC CGACACTCTT
GTCAACACCC TGCCACCTGG CTATGTTTCC GACCCGTCAT TTGATTTCGG CGTGAAGGAA
TCGGGTATCG ATCTGGTGGC TGAACTGAGC CAGCAAGATG CCGCCAAACG GGCCGGGTTG
GACCATGTCA CGACCGAACT GATGGGTAAT TTTGGCGCCC ACAGCCGCAA CATGGTGCGC
GGCGTGCTGA AAGCCAGCGC GACACCGTAA
 
Protein sequence
MKRFAVALAS VLGLAAGNAL AWSNHSFAAY RTFENMPEVA KAAVVTVEPL EAFLKAQEKS 
IETLLLSQET WAQTHLDVYP PRPAALVFRA NPTRTDEARR LAFLMALRVA PNSKLALYIQ
PDPWSPRPDA ATLLAHASVN TLPEQPNSNY RFVGIKAGDK VSPLSVLASA TDEPDYGLDI
NLWADSPSDW GKVYGFGALP FGNPALYFST QAPFHMGFYH EDRVIYLAAP FIKKTFPLLR
IHQYSSLAAL AFRTSHPYWG WRFTGLALHY VQDLTQPYHA SLSPGNSSLK LIGINLLAMA
GLPKMKDEMI VLLSNRHLAL EKYQNQLIYN ASLARQETSI EKSLRNSDKD ASYPAWSDLY
ARDVVSRQSH ALGTRLTDTL VNTLPPGYVS DPSFDFGVKE SGIDLVAELS QQDAAKRAGL
DHVTTELMGN FGAHSRNMVR GVLKASATP