| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2325 |
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| Symbol | |
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| ID | 3964320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2553435 |
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| End bp | 2554610 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917142 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_523574 |
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| Protein GI | 89901103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA AAAATCCTCC TAAAAAGAAT AACTGGTCCT GGCGCAGTCA GGCCTTTCGA
GGCCTGATTT ACCAGGTCAT CGCCATTCTG GCTATCGGCG GCTTTGTCTG GTTTCTGGCC
CACAACACCC TGCTCAACAT GCGGGTGCGT GGCATCCAGA GCGGGTTTGA CTTTCTGAAA
CAAGCGGCCG GCTTTGATAT CGGCGAAAGC CTGTATCCGT TTGACTCGGC CCAACCGTAC
TGGCAAGCCT TCCTGGTGGG CGTCACCAAC ACCCTGCGCG TGGCCGTGCT GGGCATTATT
CTGGCCACCG TGTTAGGCAC CCTGTTAGGC GTGGGGCGGT TCTCGCGCAA TGCCTTGGTG
CGCGGCCTGT GCCAGGTCTA CGTGGAGCTT TTTCGCAACA TCCCCGTGCT ATTGCAACTG
CTGCTGTGGT ACGTGATCTT GACCGAGGTA TTGCCCGCCG CATCTGATGC CTGGGTGTTC
GGCTCTTTTT TCTTGAGCAA AGGCGGGCTC AACTACCCGA TTCCGGTGTG GTCTATCGGG
CAATTGTGGG CCGCTTATGG TTTGATCCCC GGTTTGGTTT TGGCCTGGGT TTACCGGCGC
TGGGCCAAGC GCCAGTTTGA GGCGACCGGC CGGGTGCGCA GCATGGTCTG GATGCCGCTG
GTGATTGTTC TTGCGGCCAG CCTGCTCGGA TGGTTGCTCG GTGGCGCACC CACGGCATTG
AACCGACCGT TCAAAGGTGA TTTTTCGATT GAAAACGGGG GGGCGCTGAC ACCTGAGTTT
TTGGCTGTGT TATTGGGTCT GACGCTTTAC ACCGCCTCCT TCATAGCCGA AGTGGTGCGC
GGTGGCATCC AGTCGGTAGC GCTGGGCCAG AGTGAAGCGG CGGCCGCCTT GGGCCTGAGC
CGCCAGCAGG AAATGCGCCT GGTGATGCTG CCACAGGCGT TGCGCGTGAT CATCCCGCCG
CTGACCAACC AATACCTCAA TTTGACCAAA AACTCCTCGC TGGCGGTGGC CATTGGCTAC
CCCGATGTGG TCTCCATTGC CAACACCGCG CTCAACCAGA CCGGCCGCGC GGTGGAGTGC
ATTTCATTGG TGATGCTGGT TTACCTGAGC ACCTCACTGG GTACCGCCGT TCTGATGAAC
TGGTACAACA GCCGCTCTGC CATCAAAGAA CGTTGA
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| Protein sequence | MNSKNPPKKN NWSWRSQAFR GLIYQVIAIL AIGGFVWFLA HNTLLNMRVR GIQSGFDFLK
QAAGFDIGES LYPFDSAQPY WQAFLVGVTN TLRVAVLGII LATVLGTLLG VGRFSRNALV
RGLCQVYVEL FRNIPVLLQL LLWYVILTEV LPAASDAWVF GSFFLSKGGL NYPIPVWSIG
QLWAAYGLIP GLVLAWVYRR WAKRQFEATG RVRSMVWMPL VIVLAASLLG WLLGGAPTAL
NRPFKGDFSI ENGGALTPEF LAVLLGLTLY TASFIAEVVR GGIQSVALGQ SEAAAALGLS
RQQEMRLVML PQALRVIIPP LTNQYLNLTK NSSLAVAIGY PDVVSIANTA LNQTGRAVEC
ISLVMLVYLS TSLGTAVLMN WYNSRSAIKE R
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