Gene Rfer_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2324 
Symbol 
ID3964319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2552272 
End bp2553306 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content58% 
IMG OID637917141 
Productextracellular solute-binding protein 
Protein accessionYP_523573 
Protein GI89901102 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTGA GTAAATTACA AACCCTGACC GCTGTTGTGG CAACCGTGGG CGCCTTCATG 
AGCGCTCCTG CCCATGCGGG CAAGACCCTG GACGGCATCA AGGCCCGTGG CCAGGTGGTC
TGCGGTGTCA ACACCGGTCT GGCCGGTTTT GGTGCGGCTG ACTCGGCGGG CAAATGGACT
GGGTTGGATG TGGATGTATG CCGCGCCATC GCCGCCGCCA CCTTGGGCGA TGCTGAAAAG
ATCAAATATG TGCCGCTCAA TGCGCAGCAA CGCTTCACTG CCCTGCAGTC GGGCGAAGTG
GACGTGCTCT CGCGCAATAC CACATTCACC CTGACCCGCG ATGCGTCTCT AGGCCTGCAC
GACACTGCAG TGACCTACTA TGACGGTCAA GGCTTCATGG TGCCCGTCAA GAGCAAGATC
AAGAGCGCCA AGCAGCTCAA GGGCCAAACC GTGTGTGTGC AATCGGGCAC CACCACGGAA
AAGAACCTGA CCGACTACTC CAAGGCCAAC GGGCTGAACA TCAAACCGGT CGTGTTTGAA
AAGCTTGAGG CCGCTGAAAA CGCTTACTTT ACCGGTCGTT GCATTGCCTA CACAACCGAC
GCGTCTGGTC TGGCTTCGAC CCGCAACAAG GTTGCCAAGG ACCCCAAAGA ACACATCATC
CTGCCTGAAC TCATCTCCAA AGAGCCTTTG GGCCCGATGG TGCGCCGCGG TGACGACGAG
TGGTTTGCGA TTGTCAAATG GGTGATTTAT GGCCTGCTCG AAGCAGAAGA GTACGGCATC
ACCCAAGCCA ATTTGGAAGG TTTGAAGGCT ACCAGCAAAG ACCCCGTGGT GCAGCGCATC
CTGGGCACCT CTGAAGACTC CGGAAAGCTG CTGGGTCTGA GCAAGGACTG GATGGCCAAC
GCCATCAAGG CGACTGGCAA CTATGGTGAA ATTTTTGAAC GCAATGTCGG CCCCAATTCG
CCTCTGGGCC TGCCCCGTGG CGTCAACAAC CAGTGGAACA AGGGCGGCTT GATGTACGCC
TACCCGGTGC GCTAA
 
Protein sequence
MHLSKLQTLT AVVATVGAFM SAPAHAGKTL DGIKARGQVV CGVNTGLAGF GAADSAGKWT 
GLDVDVCRAI AAATLGDAEK IKYVPLNAQQ RFTALQSGEV DVLSRNTTFT LTRDASLGLH
DTAVTYYDGQ GFMVPVKSKI KSAKQLKGQT VCVQSGTTTE KNLTDYSKAN GLNIKPVVFE
KLEAAENAYF TGRCIAYTTD ASGLASTRNK VAKDPKEHII LPELISKEPL GPMVRRGDDE
WFAIVKWVIY GLLEAEEYGI TQANLEGLKA TSKDPVVQRI LGTSEDSGKL LGLSKDWMAN
AIKATGNYGE IFERNVGPNS PLGLPRGVNN QWNKGGLMYA YPVR