Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2324 |
Symbol | |
ID | 3964319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2552272 |
End bp | 2553306 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917141 |
Product | extracellular solute-binding protein |
Protein accession | YP_523573 |
Protein GI | 89901102 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCTGA GTAAATTACA AACCCTGACC GCTGTTGTGG CAACCGTGGG CGCCTTCATG AGCGCTCCTG CCCATGCGGG CAAGACCCTG GACGGCATCA AGGCCCGTGG CCAGGTGGTC TGCGGTGTCA ACACCGGTCT GGCCGGTTTT GGTGCGGCTG ACTCGGCGGG CAAATGGACT GGGTTGGATG TGGATGTATG CCGCGCCATC GCCGCCGCCA CCTTGGGCGA TGCTGAAAAG ATCAAATATG TGCCGCTCAA TGCGCAGCAA CGCTTCACTG CCCTGCAGTC GGGCGAAGTG GACGTGCTCT CGCGCAATAC CACATTCACC CTGACCCGCG ATGCGTCTCT AGGCCTGCAC GACACTGCAG TGACCTACTA TGACGGTCAA GGCTTCATGG TGCCCGTCAA GAGCAAGATC AAGAGCGCCA AGCAGCTCAA GGGCCAAACC GTGTGTGTGC AATCGGGCAC CACCACGGAA AAGAACCTGA CCGACTACTC CAAGGCCAAC GGGCTGAACA TCAAACCGGT CGTGTTTGAA AAGCTTGAGG CCGCTGAAAA CGCTTACTTT ACCGGTCGTT GCATTGCCTA CACAACCGAC GCGTCTGGTC TGGCTTCGAC CCGCAACAAG GTTGCCAAGG ACCCCAAAGA ACACATCATC CTGCCTGAAC TCATCTCCAA AGAGCCTTTG GGCCCGATGG TGCGCCGCGG TGACGACGAG TGGTTTGCGA TTGTCAAATG GGTGATTTAT GGCCTGCTCG AAGCAGAAGA GTACGGCATC ACCCAAGCCA ATTTGGAAGG TTTGAAGGCT ACCAGCAAAG ACCCCGTGGT GCAGCGCATC CTGGGCACCT CTGAAGACTC CGGAAAGCTG CTGGGTCTGA GCAAGGACTG GATGGCCAAC GCCATCAAGG CGACTGGCAA CTATGGTGAA ATTTTTGAAC GCAATGTCGG CCCCAATTCG CCTCTGGGCC TGCCCCGTGG CGTCAACAAC CAGTGGAACA AGGGCGGCTT GATGTACGCC TACCCGGTGC GCTAA
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Protein sequence | MHLSKLQTLT AVVATVGAFM SAPAHAGKTL DGIKARGQVV CGVNTGLAGF GAADSAGKWT GLDVDVCRAI AAATLGDAEK IKYVPLNAQQ RFTALQSGEV DVLSRNTTFT LTRDASLGLH DTAVTYYDGQ GFMVPVKSKI KSAKQLKGQT VCVQSGTTTE KNLTDYSKAN GLNIKPVVFE KLEAAENAYF TGRCIAYTTD ASGLASTRNK VAKDPKEHII LPELISKEPL GPMVRRGDDE WFAIVKWVIY GLLEAEEYGI TQANLEGLKA TSKDPVVQRI LGTSEDSGKL LGLSKDWMAN AIKATGNYGE IFERNVGPNS PLGLPRGVNN QWNKGGLMYA YPVR
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