Gene Rfer_2322 details

Gene Information

• Locus tag: Rfer_2322
• Symbol: prpE
• ID: 3964317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 2549246
• End bp: 2551141
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637917139
• Product: propionyl-CoA synthetase
• Protein accession: YP_523571
• Protein GI: 89901100
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.709656
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAACT ACGCTGAATT TCACCGCCGT TCACTCGAAG ATCGCGACGC ATTCTGGGGC 
GAACAAGCCC GACTGGTGGA TTGGAAAACG CAGCCACAGC AGGTCTGTGA CTACAGCAAT 
CCGCCATTTG CCAAGTGGTT TGTTGGTGGC ACCACCAATT TGTGCCACAA CGCGGTCGAT 
CGCCATCTGA AAGACCGGGC TGACCAGGCG GCGCTGATTT TTGTGTCGAC CGAGACCAAC 
CAGGAGAAGG TCTATTCGTT TCGTGAGCTG CACGCCGAGG TGCAGCGCAT GGCGGCGGTG 
CTTAAAGACC TGGGGGTGAA AAAGAGCGAC CGGGTGCTGA TCTACATGCC GATGATTGCC 
GATGCCGCGT TTGCCATGCT GGCCTGCGCG CGCATAGGTG CGATTCACTC GGTGGTTTTT 
GGCGGCTTTG CCTCGGGCTC ACTGGCCTCG CGTATTGAAG ACGCCTCGCC CAAAGTGATC 
ATCAGTGCCG ACGCCGGTTC GCGCGGCGGC AAAGCGGTGG CGTACAAACC CCTGCTGGAT 
GAAGCGATCC GCCTGTCCAG CCACAAACCG GAGGCGGTGC TGCTGGTGGA TCGCGGTCTC 
GTCCTTATGA ATCTGGTAGC GGGCCGGGAC CATCTGTGGG CGGCTCTGCG GGAAAAACAC 
ATGAGTACCG TGGTGCCCTG CGAGTGGGTC GATGCCACGC ACCCGAGCTA CACGCTCTAC 
ACCAGCGGTA CCACCGGTAA GCCCAAAGGT GTGCAGCGCG ACACCGGCGG TTACGCCGTC 
GCGCTGGCCG CCAGCATGAA ACACATTTAC TGCGGTAATG CCGGTGAAAC CTATTTTTCC 
ACCAGCGACA TCGGCTGGGT CGTAGGCCAC AGCTACATCA TTTACGGCCC CCTGGTTGCG 
GGCATGGCGA CCATCATGTA CGAAGGCCTG CCGACGCGAC CGGATGGCGG CATCTGGTGG 
AGTCTGGTCG AGAAATACAA GGTGACGGTG ATGTTCAGCG CGCCCACGGC GATCCGGGTG 
TTGAAAAAAC AGGACCCGGC GCTGCTCAAA AAATATGATT TGTCGTCACT GCGTGCACTG 
TTCCTGGCCG GCGAGCCCCT GGATCAGCCC ACCGCCCAAT GGATCAGCGA GGGCCTGGGC 
CGACCGATTG TCGACAACTA CTGGCAGACC GAGACCGGCT GGCCGATCCT GAGCATTTGC 
AAAGGCGTTG ATGATTCGCC GACCAAGTTC GGATCGCCAG GCAAGGCGGT CTACGGCTAC 
AACGTCAAAC TGCTCGACGA AAACACCGGC GAGGAACTCA AGGGCGCCAA CCAGAAGGGC 
GTGGTGGCCA TCGAGGGTCC GTTGCCGCCC GGCTGCCTGC AGACGGTGTG GGGTGACGAT 
GCGCGCTTCG TCAGCACTTA CTGGACCACC ATCCCGGGGC GCATGGTCTA CAGCACTTTT 
GACTGGGGCA TTCGCGATGC CGATGGCTAC TACTTCATCC TGGGCCGCAC CGACGATGTG 
ATCAACGTCG CCGGGCACCG GCTGGGCACG CGCGAGATTG AAGAAAGCAT CTCGGCCCAC 
CCCAACATTG CCGAAGTGGC GGTGGTCGGT GTCGCCGATC AACTCAAGGG CCAGGTCGCG 
ATGGCGTTTG CGGTGGTCAA GGACATGACC CTGGTTGCCG ACGAAGCCGG TCGCCTGAAG 
TTGGAGGGCG AGATCATGAA ACTCGTGGAC GGTGACCTGG GTGCCGTCGC CCGGCCGGCG 
CGCGTGCGCT TCGTCACGGT GCTGCCCAAA ACCCGTAGCG GCAAGCTGCT GCGCCGGGCC 
GTGCAGGCGG TTTGTGAAGG ACGCGACCCC GGGGACCTGA CAACCATGGA AGACCCGGCA 
GCGCTGCAAC AGATCAAGGA TTTGGTAACA GAGTAA 

 

Protein sequence

MTNYAEFHRR SLEDRDAFWG EQARLVDWKT QPQQVCDYSN PPFAKWFVGG TTNLCHNAVD 
RHLKDRADQA ALIFVSTETN QEKVYSFREL HAEVQRMAAV LKDLGVKKSD RVLIYMPMIA 
DAAFAMLACA RIGAIHSVVF GGFASGSLAS RIEDASPKVI ISADAGSRGG KAVAYKPLLD 
EAIRLSSHKP EAVLLVDRGL VLMNLVAGRD HLWAALREKH MSTVVPCEWV DATHPSYTLY 
TSGTTGKPKG VQRDTGGYAV ALAASMKHIY CGNAGETYFS TSDIGWVVGH SYIIYGPLVA 
GMATIMYEGL PTRPDGGIWW SLVEKYKVTV MFSAPTAIRV LKKQDPALLK KYDLSSLRAL 
FLAGEPLDQP TAQWISEGLG RPIVDNYWQT ETGWPILSIC KGVDDSPTKF GSPGKAVYGY 
NVKLLDENTG EELKGANQKG VVAIEGPLPP GCLQTVWGDD ARFVSTYWTT IPGRMVYSTF 
DWGIRDADGY YFILGRTDDV INVAGHRLGT REIEESISAH PNIAEVAVVG VADQLKGQVA 
MAFAVVKDMT LVADEAGRLK LEGEIMKLVD GDLGAVARPA RVRFVTVLPK TRSGKLLRRA 
VQAVCEGRDP GDLTTMEDPA ALQQIKDLVT E