| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2321 |
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| Symbol | sucA |
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| ID | 3964316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2546160 |
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| End bp | 2549051 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917138 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_523570 |
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| Protein GI | 89901099 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.676675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA CAACGTCTCA AGGGGCGAGT TCGACATCGT CGGTCTATCA GGCCTATCAG
GCCAATACCT ATCTTTTTGG TGGCAACGCG CCGTACGTCG AAGAGATGTA CGAAAACTAC
CTGGCCAATC CCGGTGGTGT GCCAGACAGT TGGCGTGACT ACTTCGATGC CTTGCAGCAT
GTGCCCGCCG CAGATGGCAG CAACGCCAAA GACGTGCCCC ACCTCCCCGT CATCAATGCA
TTTGCCGAGC GTGCCAAACA GGGCGGCACC AAGGTCGTGG TGGCCAATGT TGATGCCGAA
ATGGGGCGCA AGCGCACCGC CGCGCAGCAG TTGATTGCAG CCTACCGCAA CGTTGGCGTC
AGTTGGGCGG ATCTGGACCC TTTGAAGCGC GCCGAGCGGG TGGTGATTCC TGAATTGGAG
CCCTCGTTTT ACGGTTTCAG CGATGCCGAC CAGGAAGCGG TGTTTGACAC CAGCAACACC
TTCTTTGGTA AAAACAGCAT GAGCCTGCGC GAGTTGATGA ACGCGTTGCG GCAGACTTAT
TGCGGCACCA TCGGTGCGCA GTTCATGCAC ACCACGGATC AGAACCACAA ACGCTGGTGG
CAACAAAAAT TGGAGAGTAT TCGTTCCAAA CCGAGCTTCT CGGTGGAGCA ACAAAAACAC
ATTCTGGATC GGCTGACCGC CGCCGAAGGC TTGGAGCGGT TTTTGCACAC CAAGTATGTG
GGGCAAAAGC GCTTTTCCCT GGAAGGTGGC GAGAGTTTTA TCGCCTGCAT GGATGAGCTG
ATTCAATCGG CTGGCGTCAA GGGCATCCAG GAAATCGTGA TTGGCATGGC GCACCGGGGG
CGTCTGAACG TGCTGGTGAA TTCGCTGGGC AAGATGCCTG GTGATCTGTT TGCCGAGTTC
GACCATACCG CACCCGAAGA ATTGACCAGC GGGGACGTGA AATACCACCA GGGTTTCAGT
TCTGACGTCA CCACCCGCGG TGGCCCGGTG CATTTAAGTC TGGCGTTCAA CCCCTCGCAT
CTGGAGATCG TCAACCCGGT GGTTGAGGGT TCAGTGCGCG CCCGCATGGA TCGCCGCGCT
GACCCGCTCG GCAAGCAAGT GCTGCCGGTG CTGGTGCATG GCGACGCGGC CTTTTCGGGC
CAGGGTGTCA ACATGGAAAC CTTTGCGCTG GCTGAAACCC GGGGTTACTC CACGGGTGGC
ACGGTGCATA TCATCATCAA CAACCAGATC GGTTTCACCA CCAGCGATCC ACGCGACAGC
CGCTCCACAC TGTATTGCAC CGATGTGATC AAGATGATCG AGGCGCCGGT GGTGCATGTG
AACGGCGATG ACCCGGAAGC CGTGGTGCTG GCCACTCAGT TGGCGCTCGA GTTCCGTCTG
GAGTTTCGCA AGGACGTGGT GGTCGACATC GTTTGTTTCC GCAAGCTCGG CCACAATGAG
CAGGACACAC CGGCGCTGAC GCAGCCGCTG ATGTACAAGA AAATTGCAGC TCACCCCGGA
ACGCGCAGCC TGTACGCCGA CAAACTGGCA GCGCAGGGTT TGGGGGCCAC GCTCGGCGAT
GACATGGTCA AGGCCTTCCG CGCCGCCATG GATGCGGGCA AACACACGGT AGACCCGGTA
CTGACCAACT TCAAGAGTAA GTACGCTGTG GACTGGGCGC CCTTTATTGG CCAGAAGTGG
ACCGATGCCG CCGAGACCGC GATCCCCCTG GGTGAGTGGA AGCGTCTGGC TGAAAAAATC
ACCACCATTC CGGCCAGCGT GACGCCGCAC AACCTGGTTA GAAAGGTCTA TGAAGATCGC
GCCGCCATGG GCAGGGGCGA CCTGCCGGTG GACTGGGGCA TGGGCGAGCA CATGGCCTTT
GCCTCGCTGG TGGCCAGCGG CTACCCGGTG CGCCTGAGCG GCGAAGACTG CGGTCGCGGC
ACCTTTACCC ACCGGCATTC GGTGATTCAC GACCAAAACC GTGAAAAGTG GGATGTGGGC
ACCTATATCC CGCTGCAAAA CGTGACCGAC AACCAGGCTC CGTTTGTCGT CATCGACTCG
ATCCTGTCAG AAGAGGCCGT GCTGGCCTTT GAGTATGGCT ACGCGTCGAA CGAACCCAAC
ACGCTGGTGA TCTGGGAAGC CCAGTTTGGC GATTTTGCCA ATGGGGCGCA AGTTGTTATC
GACCAGTTCA TCGCCTCCGG CGAGGTGAAG TGGGGCCGCG TCAACGGCAT CACCCTGATG
CTGCCGCACG GCTACGAAGG CCAGGGCCCC GAGCACAGCT CGGCCCGACT GGAGCGCTTC
ATGCAGCTCA GTGCCGACAC CAATATGCAG GTCGTGCAGC CGACCACGGC GAGCCAGATT
TTCCACATTT TGCGGCGACA GATGGTGCGC AACATTCGCA AGCCCTTGAT CATCCTGACG
CCCAAGTCGC TGCTGCGCGC CAAGGATGCA GCGTCTCCCG TGTCCGAATT TACCAAGGGC
AGCTTCCAGA CCATCATTCC GGAACAAAAA GCGCTGAAGG CCGACAAGGT CAAGCGCCTG
GTGGCTTGTT CCGGCAAGGT CTATTACGAC CTGGTCAAAA AGCGCGAAGA AATCGCTGCC
GACGACGTGG CGATTATTCG GGTCGAGCAG TTGTATCCGT TTCCACACAA GGCGTTTGCC
GCTGAACTCA AAAGATATCC GAATGTGACG GAGGTCGTAT GGTGTCAGGA TGAGCCGCAA
AACCAGGGCG CCTGGTTTTT TGTGCAGCAT TACATCTACG AAAACATGTT TGACGGGCAA
AAACGGGGCT ATTCGGGCCG CGCGGCGTCC GCATCGCCCG CCGTGGGTTA TGCGCACCTG
CACCAGGAGC AGCAAAAAGC GCTGGTTGAA GGCGCATTCG CCAAGCTCAA AGGCACTGTC
CTCACCAAAT AA
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| Protein sequence | MSETTSQGAS STSSVYQAYQ ANTYLFGGNA PYVEEMYENY LANPGGVPDS WRDYFDALQH
VPAADGSNAK DVPHLPVINA FAERAKQGGT KVVVANVDAE MGRKRTAAQQ LIAAYRNVGV
SWADLDPLKR AERVVIPELE PSFYGFSDAD QEAVFDTSNT FFGKNSMSLR ELMNALRQTY
CGTIGAQFMH TTDQNHKRWW QQKLESIRSK PSFSVEQQKH ILDRLTAAEG LERFLHTKYV
GQKRFSLEGG ESFIACMDEL IQSAGVKGIQ EIVIGMAHRG RLNVLVNSLG KMPGDLFAEF
DHTAPEELTS GDVKYHQGFS SDVTTRGGPV HLSLAFNPSH LEIVNPVVEG SVRARMDRRA
DPLGKQVLPV LVHGDAAFSG QGVNMETFAL AETRGYSTGG TVHIIINNQI GFTTSDPRDS
RSTLYCTDVI KMIEAPVVHV NGDDPEAVVL ATQLALEFRL EFRKDVVVDI VCFRKLGHNE
QDTPALTQPL MYKKIAAHPG TRSLYADKLA AQGLGATLGD DMVKAFRAAM DAGKHTVDPV
LTNFKSKYAV DWAPFIGQKW TDAAETAIPL GEWKRLAEKI TTIPASVTPH NLVRKVYEDR
AAMGRGDLPV DWGMGEHMAF ASLVASGYPV RLSGEDCGRG TFTHRHSVIH DQNREKWDVG
TYIPLQNVTD NQAPFVVIDS ILSEEAVLAF EYGYASNEPN TLVIWEAQFG DFANGAQVVI
DQFIASGEVK WGRVNGITLM LPHGYEGQGP EHSSARLERF MQLSADTNMQ VVQPTTASQI
FHILRRQMVR NIRKPLIILT PKSLLRAKDA ASPVSEFTKG SFQTIIPEQK ALKADKVKRL
VACSGKVYYD LVKKREEIAA DDVAIIRVEQ LYPFPHKAFA AELKRYPNVT EVVWCQDEPQ
NQGAWFFVQH YIYENMFDGQ KRGYSGRAAS ASPAVGYAHL HQEQQKALVE GAFAKLKGTV
LTK
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