| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2316 |
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| Symbol | |
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| ID | 3964311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2539165 |
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| End bp | 2541177 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917133 |
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| Product | helicase c2 |
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| Protein accession | YP_523565 |
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| Protein GI | 89901094 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC AAAATCTGAC GCGTGAGACC TTTGCCCCCG GCGGCTTGTT GTCGCGCATG
GTCGAAGAGT TCACACCCAG AGTGGGCCAA ACCGACATGG CCGTGGCGGT TGCGCGAACG
ATCGAGGACG GCGGGGTGCT GGTGGTCGAG GCGGGCACTG GCATTGGCAA GACGTTCTCG
TACCTGGTTC CTGCCCTATT GAGTGGCACG CGGGTGCTGC TGTCGACCGC CACCAAGACA
TTGCAGGATC AATTGTTTGG TCGCGATCTT CCGCGTTTGA TGAAAGCCTT GAGTTTGCCA
GTCCGTACCG CCTTGCTGAA AGGCCGGGGC AGCTATTTGT GTTTGCATCG CCTGGCCGTG
GCCCGGCAGG ACGCCGATCC TTCTGATCGT GTGCTAGGGC GGACTCTGGC CAAAATCGAA
GCTTGGGCGC AGCTTACCCG CAGTGGTGAC TTGGCTGAGT TGCCGGGTCT GGATGAACGC
TCTCCCGCGA TTGCGGTGGT GACGTCAACA AGGGACAACT GTCTGGGCTC GCAATGCCCC
GAGTTTCGGG ACTGTCATGT CAATCAGGCT CGGCGCGAAG CTCTGGCCGC CGATGTGGTT
GTCATCAACC ACCATTTATT TTTTGCTGAT TTGGCGATTC GCGAGTCGGG TATGGCGGAG
TTGCTGCCGT CTGTGCAAAC GGTTATTTTT GATGAAGCGC ATCAACTCAA TGAAACTGGC
GTGCAGTTTC TGGGTCAGCA ATTGACCACC GGGCAGCTAT TGGATTTTGT TCGCGATCTG
CTGTTTCATG GCCTGCAGCA TGCGCGAGGG TTGCAGGACT GGCAGACCCT GGCATTCGAT
GCCGAGCACG CCGCGCGCGA TCTGCGACTG GTCGTGGGCC AGGCCAGCCC AGGTGCCAAA
CTGCGCTGGG TCGGGGCGGC ACCGGATCAA GTGGATGAGT CGGCCTGGCA TGATGCTCTT
GGCGCTCTGC AGGCGGCGTG TGCCCGGGTG ATGCTGGCCC TCGATACCGT CAGCGCCGTC
GCGCCGGATC TCATGCGTTT GCGTGAAAGA GCGAGCGTTT TTATCGAGAG GCTTGCTTTT
TTCTCAGACG ACTGTGCGTC TGAATCGGTG CGCTGGCTCG ATGTTGGCGT GCAACTCAGG
CTGGTCGAGT CACCCTTGGA TATTGCGAAC GCGGTTCAGA CGCGACTGAT CAAGTCAACT
GCAGCGGATG CTTCACAACG CGCCTGGATA TTTACCTCCG CAACCTTGGG TGCAGACGCC
CAGTTGCGCT GGTTTACCGA GCCCTGCGGT TTAGCCGATG CTGAAATTCT GAAAATTGAC
AGCCCATTCA ACTATGCCGA GCAGGCGGCC CTGTATGTGC CGCGGCATTT GCCCAGGCCT
AGCGATCCGG GGCACAGTGC GCAAGTGGCC GAATTTGTGG CTCGGGCGGC GTGTGTGATC
GGTGGGCGCA CGCTGGTCCT GACAACAACC CTGCGTGCAC TGCAAGCCGT GAGCGAGTCA
TTGCAGCGCC ATTTTGCCGA ATCAAGATCT CTGGAAATAC TGGTGCAGGG ACAACAGCCG
AAACGCGAAT TGATGCAGCG CTTTCGCCAG GGTGACCAGG GCGACAGGCA AGGTTGCATT
CTGGTGGCGT CAGCGTCTTT TTGGGAAGGT GTGGATGTGC CCGGCGACGC GTTACAGATG
GTGGTCATTG ACAAGCTTCC TTTTGCACCG CCCACCGATC CACTGGTGGA GGCGCGCTCC
AGACGGCTGG TGGCCGCTGG TCGCAGCGTG TTTAAAGACT ATGCTTTGCC CGAGGCGGCT
ATCGCCCTCA AGCAAGGTGC GGGTCGCCTG ATTCGACGCG AGTCTGATCG TGGTATTTTG
GTGGTGTGTG ATACCCGCCT GGCTCTCATG GGCTACGGAA AGAAGCTGCT GTCAGCCCTG
CCGTCGATGA GGCAAATCAG TTCAGAAGAA GAGCTGACCG AGGTGCTCCA GGCGCTTACC
AGACCTTCCA CCAGGGATCA GTGTTCGTTT TAA
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| Protein sequence | MNLQNLTRET FAPGGLLSRM VEEFTPRVGQ TDMAVAVART IEDGGVLVVE AGTGIGKTFS
YLVPALLSGT RVLLSTATKT LQDQLFGRDL PRLMKALSLP VRTALLKGRG SYLCLHRLAV
ARQDADPSDR VLGRTLAKIE AWAQLTRSGD LAELPGLDER SPAIAVVTST RDNCLGSQCP
EFRDCHVNQA RREALAADVV VINHHLFFAD LAIRESGMAE LLPSVQTVIF DEAHQLNETG
VQFLGQQLTT GQLLDFVRDL LFHGLQHARG LQDWQTLAFD AEHAARDLRL VVGQASPGAK
LRWVGAAPDQ VDESAWHDAL GALQAACARV MLALDTVSAV APDLMRLRER ASVFIERLAF
FSDDCASESV RWLDVGVQLR LVESPLDIAN AVQTRLIKST AADASQRAWI FTSATLGADA
QLRWFTEPCG LADAEILKID SPFNYAEQAA LYVPRHLPRP SDPGHSAQVA EFVARAACVI
GGRTLVLTTT LRALQAVSES LQRHFAESRS LEILVQGQQP KRELMQRFRQ GDQGDRQGCI
LVASASFWEG VDVPGDALQM VVIDKLPFAP PTDPLVEARS RRLVAAGRSV FKDYALPEAA
IALKQGAGRL IRRESDRGIL VVCDTRLALM GYGKKLLSAL PSMRQISSEE ELTEVLQALT
RPSTRDQCSF
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