| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2314 |
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| Symbol | |
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| ID | 3964309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2537371 |
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| End bp | 2538375 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917131 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_523563 |
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| Protein GI | 89901092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.651442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAT TGATTATATC GGGCGGGCCT GATAGCGAAG AACCCGAAGA CCGCGGCGAC
ACCGGGCCAG ACGTCGAATT GCGTCAGCTG GTTTTTGGTT CGGTCCAACA TGGACAGCGT
CTTGACCGGG CGCTGGTTGA GTTGGTGCCG GAATTTTCGC GCAGCTACTT GCAGCAGTTG
ATTGATTTGG GGGGCGTCAC CATCAATGGG ATCGTGATTC ACAAGCCGTC AACGCGAGTC
AAGGCTGCAG ATGTCGGAAC GATTGAATTG CGACCAACAC CCCAAAGTCA GGCCTTCAAG
CCGGAAACAA TGGCTCTGAA TGTGGTGTTT GAGGATGAGC ACTTGATGGT GATCAACAAG
CCGGCGGGTC TGGTGGTTCA CCCCGCCCCC GGCAACTGGA GCGGAACACT GCTCAACGGC
TTGCTGGCCC GCGACGCGAA GGCCATGAAC TTGCCGCGCG CCGGGATTGT GCATCGGCTG
GACAAAGATA CCAGCGGTTT GATGGTGGTG GCCCGGACAC GCCCGGTGAT GGATGCCTTG
ATACGATCCA TTGCGGCGCG CGAGGTCAGC CGCCAGTACG TGGCATTGGC CCATGGGCCC
TGGACGGGTA ATCGTCGGGT TGAAATCAAC GCGCCGATCG GCCGGGATCC TCGCAACCGC
TTGCGTATGG CGGTGGTGGA TTTGGCCAGA AATCCCGGTA AACTGGCCAG AACAGATGTT
GAACTTCTTC AGAATTGCGA CCAGGGATGT TGGGTTCTGT GCACCTTGCA CACAGGTCGA
ACCCATCAGA TTCGCGTTCA CATGGCAATG ATCGGCCACC CGCTGGTCGC CGATGTGCTT
TATGGGGGGC GTGCCGAGGC GGGTATGCAA CGGCAGGCCT TGCATGCTTG CCGTCTGGCT
TTTACCCACC CGGTGACATT GGAGTCGATG GTGTTTCAAG CCAGCTTGCC CGTGGACTTG
AATCTTGCGC TGGCAAACTG GGGCCTCAGT TACAATCAAA CATAA
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| Protein sequence | MTELIISGGP DSEEPEDRGD TGPDVELRQL VFGSVQHGQR LDRALVELVP EFSRSYLQQL
IDLGGVTING IVIHKPSTRV KAADVGTIEL RPTPQSQAFK PETMALNVVF EDEHLMVINK
PAGLVVHPAP GNWSGTLLNG LLARDAKAMN LPRAGIVHRL DKDTSGLMVV ARTRPVMDAL
IRSIAAREVS RQYVALAHGP WTGNRRVEIN APIGRDPRNR LRMAVVDLAR NPGKLARTDV
ELLQNCDQGC WVLCTLHTGR THQIRVHMAM IGHPLVADVL YGGRAEAGMQ RQALHACRLA
FTHPVTLESM VFQASLPVDL NLALANWGLS YNQT
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