| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2307 |
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| Symbol | ispG |
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| ID | 3964109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2530393 |
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| End bp | 2531667 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637917124 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_523556 |
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| Protein GI | 89901085 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0844808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTT TATTACCAAT CGCATCTGCA ACAGCCAAGC CGCGGCAATC CCGTCAGGCT
CGGGTGGTAT GGAACGCGCG TGTGGTCACC GTCGGCGGTG ATGCCCCTGT GCGTATTCAG
TCCATGACCA ATACCGACAC AGTCGATGTC ATCGGCACGG CTATTCAGGT CAAGGAATTG
GCGCGTGCTG GTTCTGAAAT GGTACGTCTG ACGGTGAATA CGCCAGAAGC GGCCCAGGCC
GTTCCGCACA TTCGCGAGCA ACTTGATCGC ATGGGAATTG ATGTTCCCCT GATTGGCGAT
TTCCATTACA ACGGTCATCG GCTGTTGATT GACTATCCGG CGTGCGCACA GGCCTTGTCT
AAATACCGGA TCAACCCCGG CAATGTTGGC AAGGGTGACA AGCGCGACAA ACAGTTTGGA
CTGATGATTG AAGCGGCCAT GCGATGGGAT AAGCCGATAC GTATCGGCGT GAACTGGGGC
AGCCTGGATC AGGAGTTGTT GGCGAGTTTG ATGGATGAGA ACAGTCGTCG TTCCTTGCCC
TGGGGTGCCA AGCCGGTGAT GTATGAGGCA TTGATTACTT CTGCGATTGA GTCGGCCCGT
CATGCCGTCA GGATGGGCAT GGATGAAAAC CAGATCATCC TGTCGTGCAA GGTGAGTGGT
GTTCAGGATC TGATTTCCGT TTACCGTGAA CTGGCCAAGC GCTGTGACTA CCCGCTTCAT
TTGGGTTTGA CCGAAGCCGG CATGGGCACC AAAGGTGCAG TGGCATCCGC CACGGCGCTC
TCCATTTTGT TGCAAGAAGG AATTGGCGAC ACCATTCGCG TCTCCTTGAC GCCCCAGCCG
GGCGAATCCA GGACGCAGGA GGTTGTGATT GCGGCAGAAA TTTTGCAGGC GCTGGAGCTC
AGGTCATTTG TTCCCAGTGT CACGGCCTGT CCCGGTTGTG GTCGCACGAC CAGCACCACG
TTTCAGGAAC TCACCCAGCA GATTGAAGGT TATCTGCGGG CGCAGATGCC AGTCTGGCGT
GAAAAATATC CGGGCGTGGA AAAGCTCAAG GTGGCGGTAA TGGGTTGTAT CGTCAATGGA
CCTGGCGAAA GCAAGCAAGC CGACATCGGT ATCAGTCTGC CCGGTACGGG GGAAGCCCCT
GCTGCGCCCG TCTTCATTGA TGGTGAAAAG CGCTTGACCT TGCGCGGCGA CGCCATTGCG
CAAGAATTCC AGAAAATTGT TGAAAACTAT GTTGAAAAAC GTTTTGGTGT GCAAGCCGCA
ACCGAATCGT CCTGA
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| Protein sequence | MESLLPIASA TAKPRQSRQA RVVWNARVVT VGGDAPVRIQ SMTNTDTVDV IGTAIQVKEL
ARAGSEMVRL TVNTPEAAQA VPHIREQLDR MGIDVPLIGD FHYNGHRLLI DYPACAQALS
KYRINPGNVG KGDKRDKQFG LMIEAAMRWD KPIRIGVNWG SLDQELLASL MDENSRRSLP
WGAKPVMYEA LITSAIESAR HAVRMGMDEN QIILSCKVSG VQDLISVYRE LAKRCDYPLH
LGLTEAGMGT KGAVASATAL SILLQEGIGD TIRVSLTPQP GESRTQEVVI AAEILQALEL
RSFVPSVTAC PGCGRTTSTT FQELTQQIEG YLRAQMPVWR EKYPGVEKLK VAVMGCIVNG
PGESKQADIG ISLPGTGEAP AAPVFIDGEK RLTLRGDAIA QEFQKIVENY VEKRFGVQAA
TESS
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