Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2302 |
Symbol | |
ID | 3964104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2525419 |
End bp | 2525667 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637917119 |
Product | host factor Hfq |
Protein accession | YP_523551 |
Protein GI | 89901080 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.232756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACA AAGGTCAGCT ACTCCAAGAC CCTTTTCTCA ACGCCTTGCG TCGAGAACAT GTACCGGTCT CCATTTATCT CGTCAACGGA ATCAAGCTGC AAGGTCAGAT TGAATCTTTT GACCAGTATG TCGTCTTGCT TCGCAACACG GTCACACAAA TGGTTTACAA ACACGCTATC TCCACCATTG TGCCGGGGCG TGCGGTGAAT TTTTCAACCG GTGAGGGTGA CGAACCTGCA GCCGCCTGA
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Protein sequence | MSNKGQLLQD PFLNALRREH VPVSIYLVNG IKLQGQIESF DQYVVLLRNT VTQMVYKHAI STIVPGRAVN FSTGEGDEPA AA
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