Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2300 |
Symbol | |
ID | 3964102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2522829 |
End bp | 2524223 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917117 |
Product | HflK protein |
Protein accession | YP_523549 |
Protein GI | 89901078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.194929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTC ATTTACACAC CTTTCGCTGG GCCTATTGGC CAGAGCGGAT TCGGGGGATG TTCAATCTGA ATGACCCCAG GTGGGGTCGC GGTGAGGATA AGCCAGCGGA CTCAGGCGAG CCCGAGGTCG AGCCTGAGCG CCAGGAAACC AAAGCACCCG ATACGCCCCC CAGGAATGGC AATCAACGCG GTCAAAAGCG GGGTCCCAAC CAGGGGCCAC CCGACCTCGA CGAGTTGTGG CGTGATTTCA ATCGCAAGTT GGGTGGTTTG TTTGGTAATG TGAAAAACCC AATCCGCGGC AGTGTGGGCG GCGGCATGGG CGGCAATGGC TCTGGTGGCG GTTTTCAGCC AGACATGAAG AGCGCCGGGA TTGGCATTGG CCTGATTATT GGCGTTGTAC TGTTGATCTG GCTGGGAACA GGCTTTTTCA TTGTGCAAGA AGGCCAGCAA GCGGTGATCA CCCAGTTTGG CAAATACCGG TCGACCGTGG GTGCCGGTTT TAACTGGCGT CTGCCTTACC CAATTCAGCG CCATGAACTT GTTTTTGTGA CCCAGATACG CTCGGTGGAT GTCGGGCGCG ACACGATCAT CAAGGCCACC GGCCTGCGAG AGTCCGCCAT GTTGACTCAA GATGAAAACA TTGTCGAAAT CAAGTTTGCG GTCCAGTACC GGCTCAATGA TGCGCGCGCT TTCCTGTTTG AAAGCAAGGA CCCGACGGCG GCCGTGGTTC AGGCTGCGGA AACCTCCGTG CGTGAAGTGG TTGGCAAGAT GCGCATGGAC AGCGCGTTGG CTGAAGAGCG GGACCAGATC GCTCCGCGCG TACGTGCCTT GATGCAAAAG ATACTCGACC GCTACAAGGT CGGCATTGAA GTGGTTGGCG TCAATCTGCA GCAAAGCGGT GTACGTCCTC CCGAGCAAGT GCAGGCCGCT TTCGATGATG TGCTCAAAGC CGGCCAAGAG CGCGAGCGGG CCAAGAATGA AGCACAGGCC TATGCCAACG ATGTGGTGCC ACGGGCCATC GGTTCTGCAT CACGGCTGAA GGAAGAGGCC GATGCCTACA AGGCAAGAAT TGTGGCGCAG GCGCAAGGTG ATGCGCAGCG CTTCAGGTCC GTATTGACGG AATACCAAAA AGCACCACAG GTGACGCGCG ACCGTATGTA TGTGGACACC ATGCAGCAGA TTTACAGCAG CGTGACCAAG GTCATGATTG ACTCCCGGCA GGGCTCCAAT TTGTTGTACC TGCCACTCGA CAAAATTGTC CAGATGACGG GGCAGGGCGC TGATGCCGCT ACGTTGACCG CGCCGGCGGC GGCACCGACG AATTCGGCAG CCGTCCCCAC CATTGACGCG CGTGCGCGGG ACGCTGCCCG TAGCCGTGAT CGCGATACCC GCTAG
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Protein sequence | MKLHLHTFRW AYWPERIRGM FNLNDPRWGR GEDKPADSGE PEVEPERQET KAPDTPPRNG NQRGQKRGPN QGPPDLDELW RDFNRKLGGL FGNVKNPIRG SVGGGMGGNG SGGGFQPDMK SAGIGIGLII GVVLLIWLGT GFFIVQEGQQ AVITQFGKYR STVGAGFNWR LPYPIQRHEL VFVTQIRSVD VGRDTIIKAT GLRESAMLTQ DENIVEIKFA VQYRLNDARA FLFESKDPTA AVVQAAETSV REVVGKMRMD SALAEERDQI APRVRALMQK ILDRYKVGIE VVGVNLQQSG VRPPEQVQAA FDDVLKAGQE RERAKNEAQA YANDVVPRAI GSASRLKEEA DAYKARIVAQ AQGDAQRFRS VLTEYQKAPQ VTRDRMYVDT MQQIYSSVTK VMIDSRQGSN LLYLPLDKIV QMTGQGADAA TLTAPAAAPT NSAAVPTIDA RARDAARSRD RDTR
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