Gene Rfer_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2300 
Symbol 
ID3964102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2522829 
End bp2524223 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content58% 
IMG OID637917117 
ProductHflK protein 
Protein accessionYP_523549 
Protein GI89901078 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.194929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTC ATTTACACAC CTTTCGCTGG GCCTATTGGC CAGAGCGGAT TCGGGGGATG 
TTCAATCTGA ATGACCCCAG GTGGGGTCGC GGTGAGGATA AGCCAGCGGA CTCAGGCGAG
CCCGAGGTCG AGCCTGAGCG CCAGGAAACC AAAGCACCCG ATACGCCCCC CAGGAATGGC
AATCAACGCG GTCAAAAGCG GGGTCCCAAC CAGGGGCCAC CCGACCTCGA CGAGTTGTGG
CGTGATTTCA ATCGCAAGTT GGGTGGTTTG TTTGGTAATG TGAAAAACCC AATCCGCGGC
AGTGTGGGCG GCGGCATGGG CGGCAATGGC TCTGGTGGCG GTTTTCAGCC AGACATGAAG
AGCGCCGGGA TTGGCATTGG CCTGATTATT GGCGTTGTAC TGTTGATCTG GCTGGGAACA
GGCTTTTTCA TTGTGCAAGA AGGCCAGCAA GCGGTGATCA CCCAGTTTGG CAAATACCGG
TCGACCGTGG GTGCCGGTTT TAACTGGCGT CTGCCTTACC CAATTCAGCG CCATGAACTT
GTTTTTGTGA CCCAGATACG CTCGGTGGAT GTCGGGCGCG ACACGATCAT CAAGGCCACC
GGCCTGCGAG AGTCCGCCAT GTTGACTCAA GATGAAAACA TTGTCGAAAT CAAGTTTGCG
GTCCAGTACC GGCTCAATGA TGCGCGCGCT TTCCTGTTTG AAAGCAAGGA CCCGACGGCG
GCCGTGGTTC AGGCTGCGGA AACCTCCGTG CGTGAAGTGG TTGGCAAGAT GCGCATGGAC
AGCGCGTTGG CTGAAGAGCG GGACCAGATC GCTCCGCGCG TACGTGCCTT GATGCAAAAG
ATACTCGACC GCTACAAGGT CGGCATTGAA GTGGTTGGCG TCAATCTGCA GCAAAGCGGT
GTACGTCCTC CCGAGCAAGT GCAGGCCGCT TTCGATGATG TGCTCAAAGC CGGCCAAGAG
CGCGAGCGGG CCAAGAATGA AGCACAGGCC TATGCCAACG ATGTGGTGCC ACGGGCCATC
GGTTCTGCAT CACGGCTGAA GGAAGAGGCC GATGCCTACA AGGCAAGAAT TGTGGCGCAG
GCGCAAGGTG ATGCGCAGCG CTTCAGGTCC GTATTGACGG AATACCAAAA AGCACCACAG
GTGACGCGCG ACCGTATGTA TGTGGACACC ATGCAGCAGA TTTACAGCAG CGTGACCAAG
GTCATGATTG ACTCCCGGCA GGGCTCCAAT TTGTTGTACC TGCCACTCGA CAAAATTGTC
CAGATGACGG GGCAGGGCGC TGATGCCGCT ACGTTGACCG CGCCGGCGGC GGCACCGACG
AATTCGGCAG CCGTCCCCAC CATTGACGCG CGTGCGCGGG ACGCTGCCCG TAGCCGTGAT
CGCGATACCC GCTAG
 
Protein sequence
MKLHLHTFRW AYWPERIRGM FNLNDPRWGR GEDKPADSGE PEVEPERQET KAPDTPPRNG 
NQRGQKRGPN QGPPDLDELW RDFNRKLGGL FGNVKNPIRG SVGGGMGGNG SGGGFQPDMK
SAGIGIGLII GVVLLIWLGT GFFIVQEGQQ AVITQFGKYR STVGAGFNWR LPYPIQRHEL
VFVTQIRSVD VGRDTIIKAT GLRESAMLTQ DENIVEIKFA VQYRLNDARA FLFESKDPTA
AVVQAAETSV REVVGKMRMD SALAEERDQI APRVRALMQK ILDRYKVGIE VVGVNLQQSG
VRPPEQVQAA FDDVLKAGQE RERAKNEAQA YANDVVPRAI GSASRLKEEA DAYKARIVAQ
AQGDAQRFRS VLTEYQKAPQ VTRDRMYVDT MQQIYSSVTK VMIDSRQGSN LLYLPLDKIV
QMTGQGADAA TLTAPAAAPT NSAAVPTIDA RARDAARSRD RDTR