| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2292 |
|---|
| Symbol | |
|---|
| ID | 3963334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2515353 |
|---|
| End bp | 2516402 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637917109 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_523541 |
|---|
| Protein GI | 89901070 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAA ACCCGTCGCA ACAGTCCAGT GCCGTGGCCT TCCATCCGTC GGCAGCGCCC
ATCACCTTGC CGGAATCGGC CACCTGGCCG CTGGCTGACG TGCTGGCCTT ATTTGAGTTG
CCCTTTAACG ACCTGATGTT TCAGGCGCAG CAAACACACC GCGCCCATTT CCCCAAGGGT
GATGTCGAGC TGGCAACGCT GCTGTCGATC AAGACCGGCG GCTGTGAGGA AGATTGCAGC
TACTGCCCGC AAGCGGCGCG TTACGACACC GGCGTTGAAG CCCAAAAAAT CCTGGAGCTG
GAGCAGGTGC TGGACGCCGC GCGCGAAGCC CGGGCCAGCG GCGCGACCCG TTTTTGCATG
GGTGCAGCCT GGCGCTCACC CAAAGAGCGC GACCTGGAAA AGGTTGAAGC GATGGTGCGC
GGCGTCAAGC AACTGGGTCT GGAAACCTGT GCCACGCTGG GCATGCTGGA AGAAGGCCAA
GCTGACCGTT TGAAACAAGC CGGGCTCGAT TATTACAACC ACAACCTCGA CAGTGCCCCA
GAGTTTTACA GCAACGTGAT CTCCACGCGC GAATACCAGG ACCGTCTGGA TACATTGGGG
CGAGTGCGTC AGGCCGGACT GAAGATCTGC TGCGGCGGCA TCGTCGGCAT GGGCGAATCG
CGCCAGCAGC GCGCTGGCCT GATTGCGCAA CTGGCCAACC TGAACCCGTA TCCGGAATCG
GTGCCGGTGA ATCATCTGGT GCAAGTTGAA GGCACGCCCT TGTATGGTAT CGAGCCGCTT
GATCCGATCG AATTCGTGCG CACCATTGCG GTGGCGCGCA TCACGATGCC GAAAGCGCGC
GTGCGGCTGT CAGCTGGCCG TCGTCAAATG GGCGATGCGG TGCAGGCGAT GTGCTTCCTG
GCTGGCGCCA ACTCTATTTT TTACGGCGAC AAGCTGCTCA CCACCGGCAA TCCGGAAGCC
GGGGACGACC TCGCGCTGCT GGCGAAGCTC GGTTTGAAGA CCCATGCCTC GACCCTGACC
GAAGCGCAGA AAGAGCGCTG CGGCGGCTAA
|
|---|
| Protein sequence | MSPNPSQQSS AVAFHPSAAP ITLPESATWP LADVLALFEL PFNDLMFQAQ QTHRAHFPKG
DVELATLLSI KTGGCEEDCS YCPQAARYDT GVEAQKILEL EQVLDAAREA RASGATRFCM
GAAWRSPKER DLEKVEAMVR GVKQLGLETC ATLGMLEEGQ ADRLKQAGLD YYNHNLDSAP
EFYSNVISTR EYQDRLDTLG RVRQAGLKIC CGGIVGMGES RQQRAGLIAQ LANLNPYPES
VPVNHLVQVE GTPLYGIEPL DPIEFVRTIA VARITMPKAR VRLSAGRRQM GDAVQAMCFL
AGANSIFYGD KLLTTGNPEA GDDLALLAKL GLKTHASTLT EAQKERCGG
|
|---|
| |