| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2285 |
|---|
| Symbol | |
|---|
| ID | 3963327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2508443 |
|---|
| End bp | 2509498 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637917102 |
|---|
| Product | peptidase U61, LD-carboxypeptidase A |
|---|
| Protein accession | YP_523534 |
|---|
| Protein GI | 89901063 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.346032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC ACATCTACAT CTACTCTCCA TCGGGCGCCG TGCGTGACAA GGCCGCTTTC
AAACGTGGCG TGGCGCGACT CAAATCGCTG GGCCATGAAG TTGAAATTGA CGAAGCAGCG
CTGACCAGCC ATTTGCGCTT TGCCGGAGAC GACGAGACCC GATTGGCGGC CATTCATCGC
GCTTGCGCCA GTGGCGCCGA TGTGGCACTG ATCTCACGCG GCGGCTATGG CCTGACGCGC
ATCCTGCCGG GTATTCACTA CAAGGCAGTG GCCAAAGCGA TTGATCAAGG CATGCGCTTC
GTTGGCATTA GCGATTTCAC GGCGTTTCAA AGTGCGGTGC TGGCGAAAAC CGGGCGCGTC
ACCTGGGCGG GCCCTGCGCT GTGCGAAGGT TTTGGGGTGG GTGGCAAGCC GGACGGTCAT
GATGCTGAAC TTCCACTGAC AACCACCGGG CTGACCGATG CCGCTCAGGC CGTGCCCGAC
GACATCATGG AAGCCTGTTT CGACGATTTG ATCTGTGGAC AAGGGGAGGG GGCCGGCTGG
CGGCAATTGC GTGAGCCGCA CCTGACCGCC AACAACTCTA AGGCCGCCTC TTCAAATGCT
AATGATTTAG TAGCTACCAA TGCAATATCG ACGGGGGCTG CAGCCTCATT TGGCATAAAT
CAGTCAGTAC TTTGGGGCGG CAACCTGTCG GTGCTGGTCT CACTGCTGGG CACGCCGTAT
TTTCCAGAGG TCAAGGGCGG CATCCTGTTT CTGGAAGATG TGGCCGAGCA CCCCTACCGG
ATCGAACGCA TGCTGACGCA GTTGTTGCAC GCGGGTGTGT TGGCGCGGCA AAAAGCGATT
TTGTTGGGCC AGTTCACCGA GTTCAAACTG GTGCCGCACG ACCGGGGCTA CAAATTGCAG
ACGGTCGTCA ACTGGTTGCG CCAGCAGATC AAAGTCCCGG TGCTTACCAA CTTGCCCTAT
GGCCATGTCG CCACCAAAGT GCTGCTGCCA GTGGGCGCCA AAACCGATCT GTTGGTGCAG
GGACGTGACG CCTTGCTGTT TTGGGGCCAC GCCTGA
|
|---|
| Protein sequence | MNKHIYIYSP SGAVRDKAAF KRGVARLKSL GHEVEIDEAA LTSHLRFAGD DETRLAAIHR
ACASGADVAL ISRGGYGLTR ILPGIHYKAV AKAIDQGMRF VGISDFTAFQ SAVLAKTGRV
TWAGPALCEG FGVGGKPDGH DAELPLTTTG LTDAAQAVPD DIMEACFDDL ICGQGEGAGW
RQLREPHLTA NNSKAASSNA NDLVATNAIS TGAAASFGIN QSVLWGGNLS VLVSLLGTPY
FPEVKGGILF LEDVAEHPYR IERMLTQLLH AGVLARQKAI LLGQFTEFKL VPHDRGYKLQ
TVVNWLRQQI KVPVLTNLPY GHVATKVLLP VGAKTDLLVQ GRDALLFWGH A
|
|---|
| |