| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2283 |
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| Symbol | |
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| ID | 3963325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2505745 |
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| End bp | 2507394 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917100 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_523532 |
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| Protein GI | 89901061 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCCG ACATCAATCC CGACCTGTTC ACGTCAATCC CCGATCTGCT CGAAAAAACC
GCAACCAGGT TTGCTGACCG TCCAGCTATT CACAACCTCG GTCACACCAT AAGTTACGCC
GAGTTGGAGC GCCTGACGCG TGAATTTGCC GCCTTTTTGC AGGGATTGCC AGGCATGGCC
CAGGGTGACC GCGTCGCCAT CATGGCGCCA AACCTGCTGC AATACCCGGT GGCACTGTTC
GGCATCCTGC GCGCTGGCAT GGTCGTGGTG AATGTCAATC CGCTGTACAC GCCGCGTGAA
GTGGCGCATC AGTTGCAGGA TGCCGGCGCC AAAGCCATTG TCATTGTTGA GAATTTTGCC
GCTGTGCTGC AGCGCGTGCT CAGCAACACG CCGCTCAAGC ACGTGATCAC CACGCAAGTC
GGCGACCTGC TGCCGTGGCC GAGACGTTCG TTGATCAACT TCGTCATCAA GAAGGTCAAA
AAGATGGTGC CTGCCTGGCG CATTGATGGC GCGATTGGCT TTCGGGCGGC GCTGGCACGC
GGCGCAAGGT CGTCGTTCAA GCCGGTTCAA GTGAAGCGCG AGGACATCGC ATTCCTGCAA
TACACCGGCG GCACCACCGG TGTCTCAAAG GGTGCCATGC TGACCCACCG CAACATCCTG
GCCAACGTGG AGCAAACAGG CGTCTGGATA TCGGCGAGCT TTCAGGAAGG CCGCGAGATT
GCCATTGCGC CATTGCCGCT GTATCACATC TTTTGCCTGA CCTCGACCCT GTCGTTCATG
AAGTGGGGGA GCCTGATCGT GCTGATTACC AATCCGCGCG ACTTGCCGGC ACTGATCAAG
GAGCTCGGGC GCTGGAAGTT CAGCGTCATG ACCGGCGTTA ATACCTTGTT CAACGGCCTC
TTGAATGCCC CGGGCTTCGA CCAACTCGAC TTTTCGACGT TGAAGGTGGT GGTGGGCGGT
GGTGCCGCCG TGCAAAAGAC CGTGGCCGAG CGTTGGCAGC AAGTCACTGG GCGTTACATC
ACGGAAGCCT ATGGTCTCAC AGAAACCTCG CCGGGGGTCT GCGCCAATCC GCTGGCTACA
CCCTGGAATG GAAAAATAGG TTTGCCCATC CCGTCCACTG AGGTGTCGAT CCGGGACGAA
CACTTCAACG AGTTGCCGGT CTGGCACGGC GAGGGCGATC TGGAGCAACA CACAGGCGAG
ATTTGCATCC GCGGCCCGCA AGTGATGAAG GGTTACTGGA ACAACCCGGC AGAAACGGCC
AAGGTGATGC AGGACGGTTG GTTAAAGACC GGCGATGTCG GGCACCTGGA CGGTGAGGGC
TACTTCGCCA TCACCGACCG CAAAAAAGAC ATGATTTTGG TCTCTGGTTT CAACGTCTAC
CCGAACGAAA TCGAGAGCGT GATCGCGATG CATCCTGGGG TGCTTGAATG CGGAGCGGTG
GGCATACCCG ATGAAAAAAC GGGCGAAGCG GTGAAAGTGG TGGTTGTCAG AAAAGACCCC
AGCCTCACGA AAGACGATAT CCTTGCGCAC TGCAAGACCC AACTGACCGG CTACAAGATG
CCGCGCCACA TCGCGTTTTG CGATGAATTA CCCAAGACGC CGATCGGGAA AATCCTGCGC
CGCGATCTGC GCGACATGCC CAAGAGCTAG
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| Protein sequence | MPADINPDLF TSIPDLLEKT ATRFADRPAI HNLGHTISYA ELERLTREFA AFLQGLPGMA
QGDRVAIMAP NLLQYPVALF GILRAGMVVV NVNPLYTPRE VAHQLQDAGA KAIVIVENFA
AVLQRVLSNT PLKHVITTQV GDLLPWPRRS LINFVIKKVK KMVPAWRIDG AIGFRAALAR
GARSSFKPVQ VKREDIAFLQ YTGGTTGVSK GAMLTHRNIL ANVEQTGVWI SASFQEGREI
AIAPLPLYHI FCLTSTLSFM KWGSLIVLIT NPRDLPALIK ELGRWKFSVM TGVNTLFNGL
LNAPGFDQLD FSTLKVVVGG GAAVQKTVAE RWQQVTGRYI TEAYGLTETS PGVCANPLAT
PWNGKIGLPI PSTEVSIRDE HFNELPVWHG EGDLEQHTGE ICIRGPQVMK GYWNNPAETA
KVMQDGWLKT GDVGHLDGEG YFAITDRKKD MILVSGFNVY PNEIESVIAM HPGVLECGAV
GIPDEKTGEA VKVVVVRKDP SLTKDDILAH CKTQLTGYKM PRHIAFCDEL PKTPIGKILR
RDLRDMPKS
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