| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2273 |
|---|
| Symbol | |
|---|
| ID | 3960828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2493888 |
|---|
| End bp | 2495069 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637917094 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_523526 |
|---|
| Protein GI | 89901055 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG ACGTAGTAGT TTTAAGCGCA GCCCGTTCCG CCATAGGCGC ATTCGGCGGA
TCCCTGGCCA CCATGGAGCC GTCTGAACTG GCTGGCATCG TGATGAAAGA AGCCATTGCC
CGCTCTGGCG TCGACCCCAA ACAAATCGGC AATGCAGTGG TTGGCAACTG CATTCCGACC
GATTCGCGGT ACGCCTACGT CTCTCGCGTC GCCTCCATCC AGGCCGGTCT ACCGATGGAC
TCGATCGCCA TGCAAGTCAG CCGTCTGTGT TCGTCCGGCC TGCAAGGCAT TGTGACGGCA
GCACAAAACA TCATGCTGGG TGATTTTGAT TACGGCATTG GTGGCGGTGT CGAGGTCATG
TCGCGGGGCA GCTACATGAT GCCGGCATTG CGCGCCGGTG CGCGCATGGG CGACACCAAG
GCGATCGATA TGATGGTCGC TGTTCTGACC GATCCGTTTG GTGTGGGCCA CATGGGCCTT
ACCGCTGAAA ACCTCGCTAC CAAGTGGAAC ATCAGCCGTG AGGACCAGGA TGCCTTTGCC
TGCGAATCAC AGCGCCGTGC GGCAGTGGCG ATTGCAGAAG GTCGTTTCAA ATCCCAGATC
GTTCCCATTG TTCAGCAAAC GCGCAAAGGT GAAGTCGTGT TTGACACCGA CGAACACGGC
AAGGCCAACA CCACCCTGGA ATCGCTGGCC AAAATGAAAC CGGCCTTCAA AAAAGACGGC
ACCGTCACCG CTGGAAATGC CTCGGGCATC AACGATGGTG CAGCCTTCTT CGTGCTGGCC
GCTGCCGACG TGGCCGCCAA AGCGGGTCAA AAGCCAATTG CCCGTATCGT CTCTTATGCC
ATTGCCGGGG TACCGAACGA ACTCATGGGA GAAGGCCCAA TCCCAGCCAC CAAATTGGCT
CTCAAAAAAG CAGGGTTGAC ACTCGATCAG ATGGATGTCA TCGAAGCCAA TGAAGCTTTT
GCGGCGCAGG CGATTGCAGT CAACAAGGGG CTCGGGCTCG ACCCTGTCAA GACCAACCCG
AACGGCGGCG CCATCGCGCT GGGTCACCCC GTGGGCTGCT CCGGCGCCTT CATTGCGACC
AAAGCGGTGT ACGAGCTGCA ACGCACCAGC GGCAAGTATG CACTGGCCAC CATGTGCATC
GGCGGTGGCC AGGGTATTGC GGTGATTTTC GAACGCATCT GA
|
|---|
| Protein sequence | MIKDVVVLSA ARSAIGAFGG SLATMEPSEL AGIVMKEAIA RSGVDPKQIG NAVVGNCIPT
DSRYAYVSRV ASIQAGLPMD SIAMQVSRLC SSGLQGIVTA AQNIMLGDFD YGIGGGVEVM
SRGSYMMPAL RAGARMGDTK AIDMMVAVLT DPFGVGHMGL TAENLATKWN ISREDQDAFA
CESQRRAAVA IAEGRFKSQI VPIVQQTRKG EVVFDTDEHG KANTTLESLA KMKPAFKKDG
TVTAGNASGI NDGAAFFVLA AADVAAKAGQ KPIARIVSYA IAGVPNELMG EGPIPATKLA
LKKAGLTLDQ MDVIEANEAF AAQAIAVNKG LGLDPVKTNP NGGAIALGHP VGCSGAFIAT
KAVYELQRTS GKYALATMCI GGGQGIAVIF ERI
|
|---|
| |