| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2261 |
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| Symbol | |
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| ID | 3960816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2473778 |
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| End bp | 2474839 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917082 |
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| Product | phage integrase |
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| Protein accession | YP_523514 |
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| Protein GI | 89901043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGC CCGTCCTGCA AAAAGTCCCT GCCCTGCAGC CCGCAGAACT CAGCGAGCTC
ACTCAGCATG CCGTCGAGGA CCTGCTGCGC GAAGGCGAGT CACAAAACAC CCTGGCCAGC
TACCGTAGCG CTTTGCGCTA CTGGGCGGCC TGGTATGGGA TTCGATACGG CCGTCAGATT
GACTTACCGG TGCCGACCGC TTGCGTGCTG CAGTTCATCG TCGACCATGC TCAGCGCACT
ACCGACAAAG GACTCGTGTC GGAACTGCCG GCCGAGATTG ACCAGGCCTT GGTCCAGGCC
GGCTACAAAG GCAAGCCCGG CGCTTTGGCG CACAACACGC TGGTGCACCG GATCGCGGTG
TTGTCCAAGG CCCACCAGAT GCGCGAGTTC AAGAATCCCT GCCACGACCC CAAGGTGCGC
GAGCTGCTGT CACGCACCCG CAAGGCCTAC GCCAAGCGCG GCGCCCTGCC CCAGAAAAAG
GATGCGCTGA CGAAAGATCC GCTGCAGGCG ATCCTGGCCA CCTGCGACGA CTCGCTGCGC
GGCAAGCGCG ACCGTGCCCT GCTCCTCTTT GCCTGGTCCA GTGGCGGGCG CAGACGTTCC
GAAGTGGCGG GCGCGGACAT GCAGTTTTTG AAACGGGTGG GGCCGACCGC CTTCATCTTC
ACCCTCGCCC ACTCCAAGAC CAATCAGGCT GGAACAGACC AGCCGGAAAA TGGCAAGCCG
GTACTGGGCG CTGCGGGGAC GGCACTTAAC GATTGGCTCC AGGCCGGTCC AATCACATCA
GGCGCGATTT TTAGGAGAAT TCGCAAGGGC GGGCATCTCG GTGACGCCCT CTCCCCCGCT
GCCGTGCGCA CCATCGTCAA GGACCGCTGT GCGTTGGCGG GAATTGAAGG GGATTTTTCT
GCGCATTCGT TGCGATCAGG CTTTGTGACG GAGGCCGGCC GCCAGAACGT GCCACTGGCG
GAAACGATGG CGATGACGGG GCATCACAGT TTGGCGACGG TGTTGGGGTA TTTCCGATCT
GAGAGCGCTT TGTCGAGTGC AGCCGCCCGG CTATACGAAT AA
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| Protein sequence | MRLPVLQKVP ALQPAELSEL TQHAVEDLLR EGESQNTLAS YRSALRYWAA WYGIRYGRQI
DLPVPTACVL QFIVDHAQRT TDKGLVSELP AEIDQALVQA GYKGKPGALA HNTLVHRIAV
LSKAHQMREF KNPCHDPKVR ELLSRTRKAY AKRGALPQKK DALTKDPLQA ILATCDDSLR
GKRDRALLLF AWSSGGRRRS EVAGADMQFL KRVGPTAFIF TLAHSKTNQA GTDQPENGKP
VLGAAGTALN DWLQAGPITS GAIFRRIRKG GHLGDALSPA AVRTIVKDRC ALAGIEGDFS
AHSLRSGFVT EAGRQNVPLA ETMAMTGHHS LATVLGYFRS ESALSSAAAR LYE
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