Gene Rfer_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2256 
Symbol 
ID3960811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2469576 
End bp2470586 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID637917077 
ProductDNA-directed DNA polymerase 
Protein accessionYP_523509 
Protein GI89901038 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CCACAGTGGC GCCATGGATT GCCGCGCAAA CTCAAACGCT GCTGGCGCAA 
AACGGCCACG CCTGGTTATT GCTGGGCCCC TCCGGACTCG GCCAGTACCG CCTGGCACTG
GCTCTGGTGT GCGCCTGGTT GTGTGAACAG CCGACAGAGC AGGGCGCTTG TGGCGTTTGC
GGCAGTTGCC ACGCGATCGA GGTGCGCACC CATGCTGACT TGTGCGTGTT GATGCCTGAG
ACCGTGGCAC TGGAACTGGG CTGGCCCTTG AGCGAAAAAG CGCAAGGCGA GATTGATGCC
AAAACACGCA AGCCGAGCAA GGAAATCCGG GTCGACGCCA TGCGCGACGC GGTGGAGTTT
TCGCAGCGCA CCAGCGCCCG CGGTCGGGGC AAGGCGGTGC TGGTGTTTCC GGCCGAACGC
ATGAACCACG TGACTGCCAA TGCGCTGCTC AAGACCCTGG AAGAGCCACC GGGCGACGTG
AAGTTTGTGT TGGCCAGCGA TGCCGCCCAC CAGTTGCTGC CCACGATTCG CAGTCGCTGC
CTGGCGCACA CCATGGTTTG GCCTGCGCTT GATACCTCGC TGGCGTGGTT GCAGCAGCAA
GGCCTGGACG GGCGCCAAGC GGCTGTGATG CTGCGCGCCT GCGGTGGCCG ACCGGACGAC
GCCCTGTTGT TGGCACAAGC TGGCCCCTCC GGGCCGACGC CCGCCAGCTG GGTCAAGCTG
CCCAACGCGA TGGCGCGCGG TGACGTGGGC GGACTCAAGG ACTGGACCCC AACGCAAGCC
GTCGATGCCT TGCAGAAGCT CTGTCATGAC CTGCTGGCCG TCAAAACTGG TGCCACGCCC
CGGTTTTTTG ATGCCCTTGA CTTGCCCGCC GGCAGTTCCC TGGCCACCTT GACGGCTTGG
GGCAAGGCGC TGGCAGCTGC CGTGCGCACG GTGGAGCACC CGTTTAACAG CGGTTTGATG
CTGGAAGCAT TGGTGAGTCA GGCGCAAAAT GCCATCAATG CAAAGAACTA G
 
Protein sequence
MSTTTVAPWI AAQTQTLLAQ NGHAWLLLGP SGLGQYRLAL ALVCAWLCEQ PTEQGACGVC 
GSCHAIEVRT HADLCVLMPE TVALELGWPL SEKAQGEIDA KTRKPSKEIR VDAMRDAVEF
SQRTSARGRG KAVLVFPAER MNHVTANALL KTLEEPPGDV KFVLASDAAH QLLPTIRSRC
LAHTMVWPAL DTSLAWLQQQ GLDGRQAAVM LRACGGRPDD ALLLAQAGPS GPTPASWVKL
PNAMARGDVG GLKDWTPTQA VDALQKLCHD LLAVKTGATP RFFDALDLPA GSSLATLTAW
GKALAAAVRT VEHPFNSGLM LEALVSQAQN AINAKN