| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2241 |
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| Symbol | |
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| ID | 3962042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2453978 |
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| End bp | 2455546 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917060 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_523494 |
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| Protein GI | 89901023 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0807352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC ACACCGACAA ACCGCAGTTG GCCAGCAAGC TGGTGCTGCG CCGGGTGGCG
ATCGACACCT ACCGTGAAAA CGTGGCCTAC CTGCACCGGG ACTGCGCGGT ATACCGGGCT
GAAGGCTTCC AGGCCCTGTC CAAAGTCGAG GTCCGGGCCA ACGGACGCCA CATTCTGGCC
ACCCTGAACG TGGTGGATGA CCCCAATATC GTCGCCTGCA ATGAGCTCGG CCTGTCAGAA
GACGCTTTTG CTCAGATGGC GGTGATTGAT GGTCAGCCAG CCTCGGTGTC TCAGGCCGAA
CCGCCGCAGT CCATTGGCGC GCTGCGCCGC AAATTGGCCG GCGAACGGCT CGGCCGTGAG
GACTTTCTGG GTATCGTGCG CGACATTGCC GAACTGCACT ATTCCAAAAT TGAACTGAGT
GCTTTTGTTG TGGCCACCAA CCGGGATGAA CTGGACCGCG AAGAGGTCTA CTTTTTGACC
GAGGCGATGG TGGCCAGTGG TCGAACGCTC AACTGGCATG AACCCCTGGT GGTGGACAAA
CACTGTATTG GTGGCATTCC CGGCAACCGC AGCTCTATGC TGGTGGTGCC GATTGTGGCG
GCGCACGGCC TGCTGTGCCC CAAAACATCA TCGCGCGCCA TCACCTCCCC GGCCGGTACG
GCCGACACGA TGGAAGTGCT GGCCAAGGTG GAGCTGCCTG TTGATCAGCT GGCGGACATC
GTGCGCACGC ATCGGGGCTG CCTGGCCTGG GGCGGCGCCG CCCATTTGTC GCCGGCCGAC
GATGTGCTGA TTTCGGTCGA GCGACCGCTG GCGATTGACT CGCCAGGGCA AATGGTGGCC
TCCATTCTGT CCAAGAAGAT TGCCGCGGGG TCCACCCATC TGGTCCTTGA TATTCCCATC
GGCCCCAGCG CCAAAGTACG CTCCATGCCC GAGGCCCAAC GTCTGCGCCG GCTTTTTGAG
TACGTGGCGG GGCGCATGCA TTTGTCGCTC GACGTGGTCG TGACCGATGG ACGCCAACCC
ATCGGCAATG GCATCGGACC GGTGCTTGAG GCGCGCGATG TGATGCGGGT GCTGGAGAAT
GACCCCCGGG CACCCAACGA CCTGCGACAA AAATCCTTGC GACTGGCTGG CCGACTGATT
GAATTCGACC CGGATGTGCG CGGTGGCGAC GGTTTTGCCA TTGCGCGGGA CATTCTGGAT
TCTGGCCGGG CACTGGCGAA AATGAACGCC ATTATTGCCG CCCAGGGCGC TAAGCCGTTT
GATCACAACC ATCCGCAACT CGGCGCCTTG ACCTTTGACA TTTGCGCCAG CGAGTCCGGT
GTGGTCACCG GCATTGACAA CCTGCAGGTG GCGCGCATCG CCCGCTTGGC GGGTGCACCC
AAAGTCATCG GCGCCGGCAT TGATCTTTTT CACAAATTGG GGGAGGCGGT GACCAGTGGC
GAGGTCTTGT ACCGCGTTCA CGCCGGGTTT CAAAGCGACC TCGACTTTGC GCGCCAAGCC
TGCGCCAAGT CGACCGGCTA TACCCTCGGG CGAGCCGAAG ATGTACCCCA TGTCTTTACG
GAATTCTGA
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| Protein sequence | MRKHTDKPQL ASKLVLRRVA IDTYRENVAY LHRDCAVYRA EGFQALSKVE VRANGRHILA
TLNVVDDPNI VACNELGLSE DAFAQMAVID GQPASVSQAE PPQSIGALRR KLAGERLGRE
DFLGIVRDIA ELHYSKIELS AFVVATNRDE LDREEVYFLT EAMVASGRTL NWHEPLVVDK
HCIGGIPGNR SSMLVVPIVA AHGLLCPKTS SRAITSPAGT ADTMEVLAKV ELPVDQLADI
VRTHRGCLAW GGAAHLSPAD DVLISVERPL AIDSPGQMVA SILSKKIAAG STHLVLDIPI
GPSAKVRSMP EAQRLRRLFE YVAGRMHLSL DVVVTDGRQP IGNGIGPVLE ARDVMRVLEN
DPRAPNDLRQ KSLRLAGRLI EFDPDVRGGD GFAIARDILD SGRALAKMNA IIAAQGAKPF
DHNHPQLGAL TFDICASESG VVTGIDNLQV ARIARLAGAP KVIGAGIDLF HKLGEAVTSG
EVLYRVHAGF QSDLDFARQA CAKSTGYTLG RAEDVPHVFT EF
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