| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2224 |
|---|
| Symbol | |
|---|
| ID | 3961955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2438710 |
|---|
| End bp | 2439189 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637917044 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_523478 |
|---|
| Protein GI | 89901007 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.2468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG GTTCAACCAT GAACATCTGC TACCTGATCC TGGGCGTTAT CGCACTGGTC
CCGCCAGCCA GGGCGCTCGC AGACGAGGCG CGCGCGAACT ATTTCGATGA CCCGTTCCTG
CAGATCACAG CCGCCATAAC AAATTGCCCC AAGCCAGCAG AGCCGACAAT GACGCCAGCC
CAGGTGCGAG AGGAAACACA CTGGCGAGCC GAGCGCGGCA CCAGCTGTTT TCAGTCCGGG
CGCTGCCGCC TTCCGAATGC CTATTTGTAC GACAAGGAAA TCATTCCAAG GGTCAAGAAG
GCGATTCTCG CGGATGGGCG CTTTTCGGAC ACCAGCATCT CGGTCCTGGG GCAGCGCCGG
TGGGTCTGGC TGAAGGGCTG CGTCAGCAGG CGGGAACAAT CTTCCGCCGT CGAGCAACTC
GTGCGCAATA TTGACGATGT CGAATCCGTC ATCAATCAAC TCATCGTGGT GGACAAGTAG
|
|---|
| Protein sequence | MAFGSTMNIC YLILGVIALV PPARALADEA RANYFDDPFL QITAAITNCP KPAEPTMTPA
QVREETHWRA ERGTSCFQSG RCRLPNAYLY DKEIIPRVKK AILADGRFSD TSISVLGQRR
WVWLKGCVSR REQSSAVEQL VRNIDDVESV INQLIVVDK
|
|---|
| |