Gene Rfer_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2216 
Symbol 
ID3963163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2428035 
End bp2429303 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID637917037 
Producthypothetical protein 
Protein accessionYP_523471 
Protein GI89901000 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGC ATATCGTAGA CCGCCGCCTC GATAGCAAGC ACAAGAGCTC GGTCAATCGC 
GGGCGTTTTA TTGAACGCTT CAAGGGCCAG ATTCGCAAAG CGGTGGCTGA CGCCATCAAC
AAGCGAGGCA TTCGCGATAT AGACAACGGT GAAAAAATCG GCATCTCCGG CAAAGACATC
GAGGAGCCTC AGTTTGCCCA TGGTCACGGC GGCGTCTGGG AGACGGTGCG GCCTGGCAAC
GACCGCTTCA GCCGCGGCGA GCAGGTGGAC CGGCCCAAGG GCGGTGGCGC CGGCGGCGGT
GGCAGTCAAG CCAGCAAGGA CGGCGAGAGC CTTGATGAAT TCATGTTCAC GCTGACCAAA
GACGAGTTTC TGGACATTTT CTTTGACGAG CTGGCCCTGC CGCATCTGGT CAAGCAGCAT
CTGGCCCAGA TCGAACAATA TCGGCGCATT CGGGCTGGTT ACACCCAGAG CGGCGTGCCC
ACCAATATCA ACCTCGCCCG CACCATGCGC GGCGCCGCCG GCCGGCGCAT CGCCGTCGGC
GGGCCCTACA CGGCGCAGCT GCGCGCCTTG CTGGCGCAGC TCGACGAACT CAAAGACAAG
CTCACCGACG ACGACCCGGA GCTGGAGCGT CTGCGCCAGG AGATTGCGCG CGTGCGCGCC
AAGATGGACA AGGTGCCGTT CGTCGACTCC TTTGATCTGC GCTACAACAA CCGCATTCGG
GTGCCGCAGC CCAGCACGCA GGCCGTCATG TTCTGCCTGC TCGACGTCTC GGGTTCCATG
GACGAAGAAC GCAAGAACAT CGCCAAACGC TTTTTTATGT TGCTCTATCT TTTTCTGACC
CGAAATTACG AGCGCATTGA AGTCGTGTTC ATTCGCCACC ACACGGTTGC GGCGGAGGTT
GACGAGGACG AATTCTTCAC CTCGCGCGAA TCCGGCGGCA CGGTGGTCTC CAGCGCCCTG
GAACTGATGT ACAAAATCAT CAGCGAGCGA TATCCCAGCA ACCTGTGGAA TATTTATGGC
GCTCAGGCAT CTGACGGTGA CAACTGGAAC GATGACTCCG CGCATTGCCG CGAGCTGCTG
GAGCAGTCCT TGCTGCCCCT GACGCAGTAT TTCGCCTATA TCGAAATCAC CGATGGCCCG
CCCCAAAACC TGTGGGAGGA ATACGCCAAA CTGCAGGCGG GCCATGCTGA CCACTTTGCG
ATGCGGCGCA TTGCCGCAGT GGCCGATATT TACCCCGTGT TTCGCGATCT TTTCAAGCAA
AAGATCTGA
 
Protein sequence
MPLHIVDRRL DSKHKSSVNR GRFIERFKGQ IRKAVADAIN KRGIRDIDNG EKIGISGKDI 
EEPQFAHGHG GVWETVRPGN DRFSRGEQVD RPKGGGAGGG GSQASKDGES LDEFMFTLTK
DEFLDIFFDE LALPHLVKQH LAQIEQYRRI RAGYTQSGVP TNINLARTMR GAAGRRIAVG
GPYTAQLRAL LAQLDELKDK LTDDDPELER LRQEIARVRA KMDKVPFVDS FDLRYNNRIR
VPQPSTQAVM FCLLDVSGSM DEERKNIAKR FFMLLYLFLT RNYERIEVVF IRHHTVAAEV
DEDEFFTSRE SGGTVVSSAL ELMYKIISER YPSNLWNIYG AQASDGDNWN DDSAHCRELL
EQSLLPLTQY FAYIEITDGP PQNLWEEYAK LQAGHADHFA MRRIAAVADI YPVFRDLFKQ
KI