| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2214 |
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| Symbol | |
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| ID | 3963161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2424497 |
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| End bp | 2426356 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917035 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_523469 |
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| Protein GI | 89900998 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.630644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGA TCGACATCAA AGTCCCCAAC ATTGGCGACT TCGCCGAAGT CACCGTCATC
GAGCTGCTGG TCAAGCCCGG CGACACCGTC CGGGCCGAGC AAAGCCTGAT CACAGTGGAG
TCCGACAAGG CGTCCATGGA AATTCCCTGC AGCCACGCGG GCGTCGTCAA GGAGCTCAAG
GTTGCGCTGG GCGACAAGGT CTCTGAAGGC TCGGTGTTGC TGGTGCTGGA GGCGGCAGAG
GCTCCTGTCG TTCCAGATAT CAAGCCAAAT CAGGCTGTAG CCCCCGTCGC GTCTACGCAG
GCAGCTACAC AAACAGTAGC ATCTCCAGCT GTGAGCGCGC CCATCCCAGT CGCCACTGCC
GCCAGCTATG CAGGCGGCGT CGATCTGGAT TGCGATTTGC TGGTGCTCGG CGGCGGCCCC
GGTGGTTATT CGGCTGCCTT CCGCGCGGCG GATTTGGGCC TCAAAGTCAT CCTGGTCGAG
CGCTACGCCC AACTGGGCGG TGTCTGTCTG AACGTGGGCT GCATCCCCAG CAAGGCGCTG
CTGCACGTGG CTGCGGTCAT CGATGAAGTC AGCCACATGG CCGCGCTCGG CGTGGACTTT
GGCGCGCCCA CAGTCAGTGT GGACAAGCTG CGTGCTCACA AAGAGAAAGT CGTCACCAAG
CTCACCGGCG GCCTGGCCGC CATGGCCAAG ATGCGCAAGG TGACCGTGGT GCGCGGCTAC
GGCGCGTTTG TCGGCGCCAA CCATGTGCAG GTCGAAGAAA CCACCGGCAC ATCCCAAGAG
AAAACCGGCA AGACGCAGAC CATTGCGTTC AAGAAATGCA TCATCGCTGC GGGCAGCCAA
GCCGTGCGCC TGCCGTTCAT GCCAGACGAT CCCCGCGTGG TGGACAGCAC CGGCGCGCTG
GCGCTTAAAG AGGTGCCCAA ACGCATGCTG ATCCTGGGCG GCGGCATCAT CGGCCTGGAA
ATGGGCACGG TCTACAGCAC GCTCGGCGCC CGCCTGGACG TGGTCGAAAT GCTCGACGGC
CTGATGCAGG GCGCGGATCG CGACCTGGTC AAGATCTGGC AAAAGATGAA TGCCCCGCGT
TTCGACAACA TCATGCTCAA GACCAAAACG GTCGGCGCCA GAGCCACGCC CGAGGGCATC
GAGGTGACGT TTGCCGCAGC AGAGGAGGGC GTGAAAGTGC CCGAACCGCA AACCTACGAC
CTGGTGTTGC AGGCGGTGGG CCGCACGCCC AACGGCAAGA AGATCGCCGC CGAGAAAGCC
GGCGTCGCAG TCACAGACCG TGGCTTCATC AATGTCGACA TCCAGATGCG CACCAACGTG
CCCCACATCT TCGCCATCGG CGACATCGTG GGCCAGCCGA TGCTGGCGCA CAAGGCGGTG
CACGAAGCGC ATGTGGCAGC GGAAGTGATA GCCGGTGAAT TACAAGGCAA CAAAGAGCTG
GCCAGCGCCG CCTTCAACGC CCGCGTCATC CCGAGCGTGG CCTACACCGA CCCCGAGGTG
GCCTGGGTCG GCCTGACCGA AGACCAGGCC AAGGCGCAAG GCATCAAGGT CAAGAAGGGG
CTGTTCCCCT GGACGGCGTC CGGCCGTGCC ATTGCCAACG GCCGCGACGA AGGCGTGACC
AAGCTGCTGT TTGATGACAG CGAGGACGCG CACGGCCACG GCAAGATCCT GGGCGGCGGC
ATGGTTGGCA CGCATGCGGG CGACATGATT GGTGAGATTG CGCTGGCGAT CGAGATGGGC
GCTGACGCCA TCGACATCGG CAAGACCATT CACCCGCATC CCACGCTGGG CGAGAGCATC
GGCATGGCGG CTGAAGTGGC GCATGGGAGT TGCACGGACT TGCCGCCGGC GCGTAAGTAG
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| Protein sequence | MALIDIKVPN IGDFAEVTVI ELLVKPGDTV RAEQSLITVE SDKASMEIPC SHAGVVKELK
VALGDKVSEG SVLLVLEAAE APVVPDIKPN QAVAPVASTQ AATQTVASPA VSAPIPVATA
ASYAGGVDLD CDLLVLGGGP GGYSAAFRAA DLGLKVILVE RYAQLGGVCL NVGCIPSKAL
LHVAAVIDEV SHMAALGVDF GAPTVSVDKL RAHKEKVVTK LTGGLAAMAK MRKVTVVRGY
GAFVGANHVQ VEETTGTSQE KTGKTQTIAF KKCIIAAGSQ AVRLPFMPDD PRVVDSTGAL
ALKEVPKRML ILGGGIIGLE MGTVYSTLGA RLDVVEMLDG LMQGADRDLV KIWQKMNAPR
FDNIMLKTKT VGARATPEGI EVTFAAAEEG VKVPEPQTYD LVLQAVGRTP NGKKIAAEKA
GVAVTDRGFI NVDIQMRTNV PHIFAIGDIV GQPMLAHKAV HEAHVAAEVI AGELQGNKEL
ASAAFNARVI PSVAYTDPEV AWVGLTEDQA KAQGIKVKKG LFPWTASGRA IANGRDEGVT
KLLFDDSEDA HGHGKILGGG MVGTHAGDMI GEIALAIEMG ADAIDIGKTI HPHPTLGESI
GMAAEVAHGS CTDLPPARK
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