| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2213 |
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| Symbol | |
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| ID | 3963160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2422679 |
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| End bp | 2424367 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917034 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_523468 |
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| Protein GI | 89900997 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0504217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAA TCGAAGTAAA AGTCCCGGAC ATTGGCGATT TTGATGAAGT TGCCGTGATT
GAACTGCTGG TCAAGCCGGG CGACACCGTC AAGGCTGAAC AAAGCCTGAT TACCGTCGAG
TCCGACAAGG CGTCGATGGA AATTCCGTCG TCATCGGCTG GCGTGGTCAA GGAGCTCAAG
GTCGCTTTGG GCGACAAGGT CAAGCAAGGC TCATTGTTGT TGTTGCTGGA GGTGGCTAGT
GCCGAGGGCA CCGCAGCTGC AGCACCGGCC GCCGCGGTGC CGGCAGCAGC CCAGGAATTC
AAGACAAATC AGGCTGTAGC CCCCGTTCCT CCTGCGCCAG CTGCTACTGA TGTAGCAGCA
TCGAGCGCAG GCCCGGTCGA GGTACACGTG CCTGACATTG GTGACTTCAA GGATGTGACG
GTGATTGAGG TCATGGTCAA GGTGGGCGAC GCTGTCCGGC TTGAGCAAAG CCTGATTACC
GTGGAGTCTG ATAAAGCATC CATGGAAATC CCGTCCAGCG CGGCGGGCGT GATCAAGGAG
CTCAAGGTCA AACTGGGCGA CAAAGTCAAT ATTGGCGACC TGCTGGCGAT TCTGGAAGGC
GCCGCGCCGG TTGCTATGGC TGCAGCTGCA ACTGCGCAGG CTTCAGCGGC AGCCGCTGCA
CCGCTGGTCT CGGCTGCGGC TGCTGTTGCA CCAGCAACTG CCGTGCTGGC CGTGCCCGCG
CACATCCCCA CATCGGCCCC GCTGGGTCTG CCCCACGCCT CGCCGTCGGT GCGCAAGTTT
GCCCGCGAGT TGGGCGTGCC CCTGGATGAG GTCAAAGGCA CGGGTCTCAA AGGTCGCATC
ACCGACAACG ACGTGCAAGC CTTCACCCGC TCGGTGATGA GCGGCGCGAT TCAAACGCTG
GCTGCTCAGG CACAGCCCAA GGCAGCCGCA GCCGCTCCAG GCGCTGACGG CGCAGGCCTG
GGCCTGATCC CGTGGCCGAA AGTGGACTTT GCCAAGTTTG GGCCGGTCGA GCGCAAGGAA
CTCAGCCGCA TCAAGAAAAT CAGCGGTGCC AACCTGCTGC GCAACGCGAT CCTGATTCCG
GCCGTGACCA ACCATGACGA CTGTGACATC ACCGACCTGG AAGCCTTCCG GGTCTCGACC
AACAAAGAGA ACGAGAAGAG TGGCGTGAAG GTCACCATGC TGGCGTTCCT GATCAAGGCC
TGCGTGGCCG CGCTCAAGAA ATACCCCGAG TTCAACAGCT CGCTGGACGG CGACGCGCTG
ATCTACAAGC AGTACTACCA CATCGGTTTT GCGGCGGACA CGCCCAACGG CCTGATGGTG
CCGGTGATCA AGGATGCTGA TCAAAAAGGC ATCATGCAAA TCTCGGTCGA GATGGGCGAA
CTGGCCAAAA AGGCGCGCGA TGGCAAGTTG AGCCCGGCCG AGATGACCGG CGCCAGCTTC
ACCATCAGCA GCCTGGGCGG CATTGGCGGG CGTTATTTCA CGCCCATCAT CAACGCGCCT
GAAGTGTCGA TTCTGGGCGT GTGCCGCTCC ACCATCCAGC CGGTGTGGGA TGGCAAGGCG
TTCCAGCCAC GCCTGATGCT GCCGCTGTCA CTTACCTGGG ACCACCGCGT GATTGACGGT
GCCGCTGCGG CCCGCTTCAA TGTCTATCTG GGCCAAATCC TGGGCGATTT CCGCCGGGTG
TTGCTTTAG
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| Protein sequence | MSLIEVKVPD IGDFDEVAVI ELLVKPGDTV KAEQSLITVE SDKASMEIPS SSAGVVKELK
VALGDKVKQG SLLLLLEVAS AEGTAAAAPA AAVPAAAQEF KTNQAVAPVP PAPAATDVAA
SSAGPVEVHV PDIGDFKDVT VIEVMVKVGD AVRLEQSLIT VESDKASMEI PSSAAGVIKE
LKVKLGDKVN IGDLLAILEG AAPVAMAAAA TAQASAAAAA PLVSAAAAVA PATAVLAVPA
HIPTSAPLGL PHASPSVRKF ARELGVPLDE VKGTGLKGRI TDNDVQAFTR SVMSGAIQTL
AAQAQPKAAA AAPGADGAGL GLIPWPKVDF AKFGPVERKE LSRIKKISGA NLLRNAILIP
AVTNHDDCDI TDLEAFRVST NKENEKSGVK VTMLAFLIKA CVAALKKYPE FNSSLDGDAL
IYKQYYHIGF AADTPNGLMV PVIKDADQKG IMQISVEMGE LAKKARDGKL SPAEMTGASF
TISSLGGIGG RYFTPIINAP EVSILGVCRS TIQPVWDGKA FQPRLMLPLS LTWDHRVIDG
AAAARFNVYL GQILGDFRRV LL
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