| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2211 |
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| Symbol | |
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| ID | 3963158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2417053 |
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| End bp | 2419641 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917032 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_523466 |
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| Protein GI | 89900995 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.508108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCAT CTACACTCGG CACTATGCCT TCAAGTTCTC TTATTCCACT CGCCGGTCCT
GAGAAACTCA CGCCGCCGGC AAGGTTAAAA CGCTGGTGGC AGCGTTTGGC GCCGCAACGG
CAGGACCGTT TTGCCGTGCT GGCGCCACTG GTGGCTGTGG TTCTGTTTTT GGCCGCCATC
GTGGCGGCAT TCGGTTATCT GCGACTGGAG GAAATCGAAC GTGAGCAAGA AGCGGTCAAT
CGGGACGTGG AGTACACGCA GCAGCGTCTG CGTCTGCGGC TGCTGGAGCG CCAGGAACAG
CTCATGCGGA TCGCGCGTGA GGTTTCCAAC CGGGAGCTCG ATGCGGACGA GTTCCAGAGC
CGGGCCGAGG CGATCGTCAA CCAATACCCC GAGTTGGAAA GCCTGAGCTG GATTGACAAC
CGTCGCAACG TCAAAGCCAG CTTCGGCTCC GTCAGTCTGG CGCCGCACCT GGTTAAAAAA
ATAGGCAGCA CACTGGAGCC AGGCGAATCG GTCAGCAGCT ACAACCTGGC ACGCGAGCTG
CAGCAACCCA TTTACGCGAT GCACGCGGCA GGTGCCAACA GTCCTGCCGT GCTGCAATTG
CACATTCCAT TCAGCGACCG CGCCCGCTTT TTGGGTGTTC TGCTGGCCGA ATACTCCATC
GACGGTTTGT TCCGTTATGG CGTGCCCGCC GAGGTGTCAG CCCGTTACGC GGTCTCGTTC
CATGATGCCA ACGGGGGCCT GCTGGCGGGC ACCAGCATTG CGCCGCGCAA GCCCGGCGCC
CGCTTGCTGC CGTGGGACAA ACCGGTCAAT TTTTATGAAG TCCCGGTATC CCCGGTAGGC
AATGGCCTCA TCATCCGGGC CCAGGCGTAT CGGGCCTCGC TGGGCGTGGT GGGCAGTGGG
CTGTTCTGGC TGGTTAACGC CCTGAGCCTG ATGACGGCCT GGATGTTGAT CGCCAACTGG
CGCCATACCC GCCGGCGCAT GCAGGCGCAG CAGGCGCTGA TATCGGAAAC CAGCTTTCGC
CGGGCCATGG AAAACTCCAT GCTGACGGGC ATGCGCGCGC TCGATCTGCA GGGCCGCATC
ACCTATGTCA ATCCGGCTTT TTGCCGCATG ACCGGGTGGA GTGAACCCGA CCTGGTGGGG
CGAACCGCGC CTTTTCCCTA TTGGCCCGAG GCTGACATTG ATTCCTTGTC TTCACGCCTG
CAAGAAGAAC TGGCCGGCAA GATTCAGTCC AGTGGCATCC AGTTCCGGGT CAAGCGCCGC
GACGGATCGC TGTTTGACGC GCGGCTTTAT GTCTCACCGC TGATTGATGC CCATGGCATA
CAAACCGGCT GGATGACGTC CATGACCGAC ATCAGTGAAC CGAACCGGAT TCGGGATCAA
CTGTCGGCCT CACACGAACG CTTTACCACG GTCCTCGAAG CGCTGGACGC CTCGATCTCG
GTGGCGCCGC TGGGCAGCGA CGAGCTGTTG TTTGCCAACA AACTGTACCG GCTGTGGTTT
GGAACCGAAG CGGGCGGACA TCTGCAACTG GTCGCCGAGG CCGGTGTACC GGCAACGCCC
ACCAGTGATG ACTCGCTTGA CCCCGTAGAC GCTTTTGCCG GTCTGCCCAC CAACTCGCTG
CCCGACAGCG ATCCTGAAAG TGCCGAGCTG TACGTCGACG CCCTGGGCAA GTGGTTGGAG
GTGCGCACCC GTTATTTGAG CTGGGTCGAT GGTCGCCTGG CGCAAATGGT GATTGCCACA
GACATCACCG CGCGCCGGGT TGCCGAGGAA CAATCTGCGG CCCAAATCGA GCGTGCCCAG
ACCGCCAGCC GCTTGATCAC CATGGGTGAG ATGGCCTCCA GCGTGGCGCA CGAACTCAAT
CAGCCGCTGA CCGCCATCAA CAACTACTGC AACGGCATGG TGTCGCGCAT CAAGTCGCAG
CAAATCAGTG AAGACGAGTT GCTGGGTGCA CTGGAAAAAA CTGCCAAGCA GGCGCAGCGG
GCCGGTCAGA TCATTCATCG CATTCGCTCT TTCGTCAAAC GCAGCGAGCC CAACCGCTCG
CCATCGAACA TCGAAAGCAT GGTGGACGAA GCGGTGGAAT TGGTGGAAAT CGAGATGCGC
CGGCGCAACG TGCGCCTCAC CCACTATGTG GCCCCGCGCC TGCCGGTCCT GCTGGTGGAC
CCGATTCTGA TCGAGCAGGT ACTGGTCAAT TTGCTTAAAA ATGCCGCCGA ATCTGTGGAT
GCCGCCCAGC GGCCCACGGC ACAACGCAGT GTCATGTTGC GCGTCGCGCC AACGCAGGTC
GACGACAAAC CGGTGATTGA ATTCGCCGTG CTGGACTCCG GCCAGGGGCT CGCGCCCGAG
GTGATGGCGC GGCTGTATGA GGCTTTTCAT TCCACCAAAG CCGAAGGCAT GGGCATCGGC
CTGAGCCTGT GCCGCTCGAT TGTGGAATCG CACCTGGGCC GGATGAAAGC CGAGAACCTC
TACAATGGCC CCGATCTGAC CGGCTGCTGT TTCTCGTTCT GGATTCCCAT GATAGAAGTG
CTGCCACCGA AGGCACGTCT GCCAGCCGGT CAAGCCAACG ACAACCAAGG ACACCCAAGT
AAAACATGA
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| Protein sequence | MLASTLGTMP SSSLIPLAGP EKLTPPARLK RWWQRLAPQR QDRFAVLAPL VAVVLFLAAI
VAAFGYLRLE EIEREQEAVN RDVEYTQQRL RLRLLERQEQ LMRIAREVSN RELDADEFQS
RAEAIVNQYP ELESLSWIDN RRNVKASFGS VSLAPHLVKK IGSTLEPGES VSSYNLAREL
QQPIYAMHAA GANSPAVLQL HIPFSDRARF LGVLLAEYSI DGLFRYGVPA EVSARYAVSF
HDANGGLLAG TSIAPRKPGA RLLPWDKPVN FYEVPVSPVG NGLIIRAQAY RASLGVVGSG
LFWLVNALSL MTAWMLIANW RHTRRRMQAQ QALISETSFR RAMENSMLTG MRALDLQGRI
TYVNPAFCRM TGWSEPDLVG RTAPFPYWPE ADIDSLSSRL QEELAGKIQS SGIQFRVKRR
DGSLFDARLY VSPLIDAHGI QTGWMTSMTD ISEPNRIRDQ LSASHERFTT VLEALDASIS
VAPLGSDELL FANKLYRLWF GTEAGGHLQL VAEAGVPATP TSDDSLDPVD AFAGLPTNSL
PDSDPESAEL YVDALGKWLE VRTRYLSWVD GRLAQMVIAT DITARRVAEE QSAAQIERAQ
TASRLITMGE MASSVAHELN QPLTAINNYC NGMVSRIKSQ QISEDELLGA LEKTAKQAQR
AGQIIHRIRS FVKRSEPNRS PSNIESMVDE AVELVEIEMR RRNVRLTHYV APRLPVLLVD
PILIEQVLVN LLKNAAESVD AAQRPTAQRS VMLRVAPTQV DDKPVIEFAV LDSGQGLAPE
VMARLYEAFH STKAEGMGIG LSLCRSIVES HLGRMKAENL YNGPDLTGCC FSFWIPMIEV
LPPKARLPAG QANDNQGHPS KT
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