| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2203 |
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| Symbol | |
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| ID | 3963150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2408035 |
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| End bp | 2409912 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917024 |
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| Product | DNA primase |
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| Protein accession | YP_523458 |
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| Protein GI | 89900987 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.198077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATTC CCCAGACCTT TATTCAGGAG TTGCTCGCAC GCGCCGACGT GGTGGAGATC
GTGGGCCGTT ATGTGCAGCT TAAAAAGGGC GGCGCCAACT TCATGGGCCT GTGCCCGTTT
CACGGGGAAA AGTCGCCCTC CTTCTCGGTC AGCCCGAGCA AGCAGTTTTA TCACTGCTTT
GGCTGTGGCA AAAACGGCGA TGCCATCAGT TTCTTGATGG AGCACGCGGG CATGACCTTT
GTGGAGGCGG TGCAAGACCT GGCCCAGCAA TATGGTCTGC AAGTGCCTGA GGACGACGCC
AGCCCGCAGG ACCGGGCGCG CGCGCTTGAG CAGCGGCAAA AGCAGACTAC CTTGACCGAC
GTGCTCGAAA GAGCAAACGA TGCCTACAGA AAGCAGCTGA AAGAGTCCCC GCGCGCCGTG
GACTACCTCA AGGGTCGCGG CGTCTCAGGT GAAATTGCCA AACAGTTTGG TTTGGGTTAC
GCGCCCGAGG GCTGGCGCAG TCTGGCCAGC GTTTTCCCCA GCTATGACGA TCCACTGCTG
GTCGAAAGCG GTCTGGTGAT CCTGAATGTT GACGAGAATT CGGGTGAAGA AAAGCGCTAC
GACCGTTTTC GCGACCGGGT CATGTTCCCG ATCCGCAACG TCAAGGGCGA ATGTATTGGT
TTTGGTGGCC GGGTGCTGGG CGACGACAAA CCCAAATACC TCAACTCACC GGAAACCCCT
GTTTTCAGCA AGGGACGTGA ACTGTACGGC CTGTTTGAAG CCCGCAACGC GCTGCACGAG
CAGGGCTACG CGCTGGTGAC CGAAGGTTAC ATGGATGTGG TGGCGCTGGC CCAACTCGGT
TTCTCCAATG CCGTGGCCAC GCTGGGCACC GCCTGCACGG CAGAACATCT GCACAAGCTG
TTTCGCTTCA CCGATGCCGT GGTGTTCAGT TTCGATGGCG ACGCGGCCGG CCGACGTGCC
GCGCGCAAGG CACTCGATGG CGCCCTGCCC TTTGCCACCG ATGTGCGCAG CGTCAAGTTC
CTGTTCTTGC CGCCTGAACA CGACCCCGAC AGCTTCATCC GGGAATTTGG CAAGGAAGCC
TTCGCCCGCT ATGTGAGCGA AGCCGTCCCC TTGAGCCGCT TTTTGATTGA CGCGGCGCGC
GAAGGCTGCG ACCTGAACAC GGCTGAAGGC CGCGCCCACT TCGCCAGCAA TGCCAAACCG
CTGTGGCTGC TGCTGCCCGA TGGTGCCCTG AAGCTGCAGT TGCTGAGCGA AATTGCCGAC
CTGGTGCAGT TGTCGAGTCG TGAATTGACC GAAGTGTGGA ACCCATCAGC CGCAGGCAAA
GGCAATGCAA AATCAAAAAC CTATGAAAAA CATAGCGCAT CACCCAATGA ATACGGGGGC
TACAGCCAGA AATCATCTAT AAAACCGCCA CCACGTCCGC GTCCAGGTGG CCGCGTTCGG
CCCACCAGCC GGGCCGACTA CGCCGCCCGC CTCTTGCTGG GTGACATGGC CGCGCTTGAA
GTCCTGTCAG CCGAAGACCA CACGCTGCTG TGTGACTTGC CGGAACCGCA CGGACCGCTT
TTTGTGTGGC TGGAAAACCA ACTGCATGAA CACGGCCCGC AAGCCTGGGT GGCGCTGCGT
GAAGGACTGC GCGGGCGCCA GGAGGAAGAA CTCGCCGTTC GGCTCATGAC CGGCTACGAG
CTGGCCGGCC CGCTGGAGAC GGATGAATCC AGTAAGGAAC TGCGTGACCT GCTTAACCGC
ATGTTGGTTG AAAAGCTCAA AGTGCAGGAA ACCGAAGCCA TCCAGGCGGC CAAAGCGGAT
CCGGGCGCAC TGCAACGCTA CCGCGAGCTG CAGGCGCGTC GCTTCAAACT CGAATCGGTG
CCGACTCGCT CTGAATAA
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| Protein sequence | MSIPQTFIQE LLARADVVEI VGRYVQLKKG GANFMGLCPF HGEKSPSFSV SPSKQFYHCF
GCGKNGDAIS FLMEHAGMTF VEAVQDLAQQ YGLQVPEDDA SPQDRARALE QRQKQTTLTD
VLERANDAYR KQLKESPRAV DYLKGRGVSG EIAKQFGLGY APEGWRSLAS VFPSYDDPLL
VESGLVILNV DENSGEEKRY DRFRDRVMFP IRNVKGECIG FGGRVLGDDK PKYLNSPETP
VFSKGRELYG LFEARNALHE QGYALVTEGY MDVVALAQLG FSNAVATLGT ACTAEHLHKL
FRFTDAVVFS FDGDAAGRRA ARKALDGALP FATDVRSVKF LFLPPEHDPD SFIREFGKEA
FARYVSEAVP LSRFLIDAAR EGCDLNTAEG RAHFASNAKP LWLLLPDGAL KLQLLSEIAD
LVQLSSRELT EVWNPSAAGK GNAKSKTYEK HSASPNEYGG YSQKSSIKPP PRPRPGGRVR
PTSRADYAAR LLLGDMAALE VLSAEDHTLL CDLPEPHGPL FVWLENQLHE HGPQAWVALR
EGLRGRQEEE LAVRLMTGYE LAGPLETDES SKELRDLLNR MLVEKLKVQE TEAIQAAKAD
PGALQRYREL QARRFKLESV PTRSE
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