| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2197 |
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| Symbol | |
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| ID | 3960997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2397136 |
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| End bp | 2400045 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917018 |
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| Product | ribonucleotide reductase large subunit |
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| Protein accession | YP_523452 |
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| Protein GI | 89900981 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.195506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA AAACTCCCTC ACGAACAAAG CCAATCCACG CCCTTGCCCC CCAGCCCATC
AGCGAAGAGG TTCTGATTGA GAAGTACAGC AAAGGGTCCG AAAAAACCAT TGTTGACGTC
AATCAGCGTG TTGCACATGC TTTGGCTCAG GTAGAGGCGC CAGAGCAGCA AAAGCAATGG
GAAACCAAGT TTCTGCAGGC CCTGCAAAAC GGATTCCTAC CCGCCGGACG CATTCAATCC
GCGGCTGGCA CTGATCTGGC TGCCACCTTG ATCAACTGTT TTGTGCAGCC CGTCGGCGAC
TCGATCGCCC ATGTGGAAGA CGGACATCCC GGCATTTACA CCGCGCTGAC CGAGGCGGCC
GAGACCATGC GTCGTGGCGG TGGCGTGGGT TATGACTTCT CCCGCATCCG CCCGCGCGGC
GCCTGGGTTG GCAGCACGCA AAGCAGTGCG TCAGGCCCCG TGAGCTACAT GCGCGTGTTT
GATCGGTCCT GCGAAACGGT CGAATCCGCT GGCGCCCGGC GTGGCGCACA AATGGGTGTT
CTGCGCTGCG ATCATCCTGA TATTGAAGAG TTCATCCATG CCAAGGACAC CGGTGACCTG
AAGAATTTCA ATATTTCAGT GGGTATCACC GATACCTTCA TGCAGGCGGT GCAAAAAGAC
GCGGCATTTG CCCTTGTCCA TCGTGCTGAA CCAGGACCTG CGCAAAAAGA AGCGGGGGCG
CATCATGTGA CTGACAGTGG TATCTGGGTC TACCGGACCT TACAAGCGCG CGAATTATGG
GATCAAATCA TGCGCTCGAC CTATGATCAT GCCGAGCCCG GTGTCTTGTT CCTGGATCAC
ATCAATCGCG ACAACAACCT CTCTTATTGC GAGACTATTG CCAGCACCAA TCCTTGCGCT
GAGCAGCCCT TGCCTCCTTA CGGTTGCTGT TGCCTGGGCT CGATTGATCT GACACGCTTC
ATCAAACAAC CCTTTGAAAA GGCTGCCAGT TTTGACAAGG CGGCTTTTGT CGAAGTAGCG
CGCGTAGCAA CGCGCATGCT CGACAACGTA CTTGACGTGA CGGTCTGGCC CTTGCCACAG
CAACAGGAAG AGGCGCGCAG CAAGCGCCGC ATTGGCCTGG GTTATACCGG GCTCGGTGAC
GCTCTGGTGA TGCTCAATTT GCGCTACGAC ACGCAAGCGG CACGCGACAT GGCACGCGAT
ATTTCCGAAT TGATGCGCGA CACCGCCTAC GATGCCTCGG TCGATCTGGC GCAAGAACGC
GGGGCCTTCC CCTTGTTCAA TGCTGATCTT TACCTCACCG GCCAGAGGTT CGCATCGCGT
TTGCCACCCG CCCTGAAGGA ACGCGTTCGT ACGCATGGTC TTCGCAACTC GCATTTACTC
TCGATTGCGC CTACCGGCAC CATCAGCCTG GCTTTTGCGG ATAACGCCAG CAACGGCATC
GAGCCCGCGT TCAGCTGGAG TTACACCCGC AAAAAGCGCA TGGCTGACGG CAGCTTCAAA
GAGTATGCTG TGGAAGATCA CGCCTGGCGC CTTTATCGCC ACCTTTATGG CAAGGACACC
GCACTGACCC CGGCATTCGT TACCGCGCTG GAAATGAGTG CCCAGGCCCA TGAAGCCATG
GTGGCCGCAG TTGCGCCGTT TATTGATACC GCCATTTCCA AGACGGTCAA TGTTCCGGTT
AACTATCCCT ATGCCGACTT TCAGAACCTG TATATGGAGG CCTGGCAGTC GGGCTTAAAG
GGCTTGGCCA CCTATCGACC CAACTCGGTG CTGGGGTCGG TGTTGAGCGT GACGCCTGCC
TTGGGCTCAT CCTCCGCCCC AGCCGCCGCA ACAGCCTTGC AAATTGACAG CGCGAACCAG
CGACTGGCGC TGGAGCGTCT GCCAGCCGCT GTGCTGTCGT CCTTGCGCTG GCCGAGTCGC
CCCGAGCTGC CTGCGGGCAA TCCGGCTTGG ACGTTCATGG TGCATCACCC TTTTGGGGAC
TTTGCATTAT TCGTTGGTGA GTTGGCCCCC GAAGAAGGCG GCGCGCCCAA ACCCTTCGAG
GTGTGGGTCA ATGGCACAGA GCAGCCGCGT GGTTTGGGCG CACTCGCCAA AACGCTTTCC
ATGGATTTGC GCGCCAATGA TCCGGCCTGG TTGCAGTTGA AGCTCGACGC ATTGGCCACG
GTCGCCGAGG AGCATTCGTT TGAGATGCCA TTTCCGCCGC ATGGCCAACT CCGTCTGTTC
CCGGGTGTGG TGGCTGCCAC GGCGGCGGTC ATTCGCTGGC GCTGTGATCA ACTCACGGCC
TTGGGCGGCA ACGACACCAA AGTGCCAACG CCCGTGCTGG ATGCCATGTT CAGCCGGGGC
GAACCGCAGA CTGGTCCCTC GGGCACGCTG GCATGGTCGG TGGATGTCGA CAATCCCGCG
ACTGGCGAGG CATTCACTGT CACACTCAAA GAGGTGAATT TGCCCGGTCC TGACGGTGCC
ATTGTGACCC GACCTTGCTC CGTCGGCTTT TCAGGTAATT ACCCAAGAGC ACTCGATGGA
TTGGCCCGAC TGCTCTCGCT GGACATGCGA GTGATCGATC CGGCGTGGAT CGGCATGAAG
CTGCGCAAGC TGCTCAACTA TGCTGAACCG TTGGGCCACT TCATGGCATT TGTGCCGGGC
TTGCCGCGTG GGGAGCGCCG CCAGCAGACC TGGCCTTCAA CGGTTGCGTA TGTCGCGAGA
CTGATTATTC ACCGCTATGC CATGCTTGGG GTGCTTGACG AGGAAGGTTT CCCCTTGCGT
GACATGGGCG TGCTTGATGC CCCAAAAAAT CAGGGAGCAC CAAGTACCAT GGCCGGCAAA
ATCTGCCCGG AATGCGGAAA TCCAACCGTC ATTCACAAAG ATGGATGTGA TTTCTGTACC
GCCTGTGGCT ACGTTGGACA GTGCGGTTAA
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| Protein sequence | MTQKTPSRTK PIHALAPQPI SEEVLIEKYS KGSEKTIVDV NQRVAHALAQ VEAPEQQKQW
ETKFLQALQN GFLPAGRIQS AAGTDLAATL INCFVQPVGD SIAHVEDGHP GIYTALTEAA
ETMRRGGGVG YDFSRIRPRG AWVGSTQSSA SGPVSYMRVF DRSCETVESA GARRGAQMGV
LRCDHPDIEE FIHAKDTGDL KNFNISVGIT DTFMQAVQKD AAFALVHRAE PGPAQKEAGA
HHVTDSGIWV YRTLQARELW DQIMRSTYDH AEPGVLFLDH INRDNNLSYC ETIASTNPCA
EQPLPPYGCC CLGSIDLTRF IKQPFEKAAS FDKAAFVEVA RVATRMLDNV LDVTVWPLPQ
QQEEARSKRR IGLGYTGLGD ALVMLNLRYD TQAARDMARD ISELMRDTAY DASVDLAQER
GAFPLFNADL YLTGQRFASR LPPALKERVR THGLRNSHLL SIAPTGTISL AFADNASNGI
EPAFSWSYTR KKRMADGSFK EYAVEDHAWR LYRHLYGKDT ALTPAFVTAL EMSAQAHEAM
VAAVAPFIDT AISKTVNVPV NYPYADFQNL YMEAWQSGLK GLATYRPNSV LGSVLSVTPA
LGSSSAPAAA TALQIDSANQ RLALERLPAA VLSSLRWPSR PELPAGNPAW TFMVHHPFGD
FALFVGELAP EEGGAPKPFE VWVNGTEQPR GLGALAKTLS MDLRANDPAW LQLKLDALAT
VAEEHSFEMP FPPHGQLRLF PGVVAATAAV IRWRCDQLTA LGGNDTKVPT PVLDAMFSRG
EPQTGPSGTL AWSVDVDNPA TGEAFTVTLK EVNLPGPDGA IVTRPCSVGF SGNYPRALDG
LARLLSLDMR VIDPAWIGMK LRKLLNYAEP LGHFMAFVPG LPRGERRQQT WPSTVAYVAR
LIIHRYAMLG VLDEEGFPLR DMGVLDAPKN QGAPSTMAGK ICPECGNPTV IHKDGCDFCT
ACGYVGQCG
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