| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2192 |
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| Symbol | |
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| ID | 3960992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2392928 |
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| End bp | 2395237 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917013 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_523447 |
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| Protein GI | 89900976 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG4147] Predicted symporter
[COG4327] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03647] probable solute:sodium symporter small subunit
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.560167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATC CAGCGGTGGA GGTAGGTGAA TTCAAGCCAA TACCAGGCGG TTTTCGCTTG
CATGGCTGGC TTCTTGCGAT CTGGTTTGCG GCGTCGTTCG GCGTGGTGTT CTTCGCACGC
GACCTGCAGA TAATCGTCGC TGGCTGGCCC TTGGGCTACT GGTTCGCGGC CCAGGGCAGC
GTGTTTATTT TTATCGCCGT CGTGGCGGTG TTCGCCTGGG TTGCGAATCG GCGCGACAGA
GAAATTACGA CGGCCGATGC TGCATACACC GCCTACAAGC ACCGGCTTCA TTGGCGATTC
TCCGCGTACG TTGTTTGCTT GCTGCTGTTC TTGCTGGCTC TGGCCCTCGC CGAGAGGTTG
GGGCTGAAGA AGATGTGGGT TGGTTCCATT TTTTTGTTCG CCACAGTCGC CTTGTACGCA
GTGATAGGGA TCTACGGTCG TACTTCGGAT GCCTCGGAGT ATTACGTTGC CGGACGCAGC
ATCCCCGCTG TTTACAACGG CATGGCGGTT GCCGCCGACT GGATGAGTGC TGCCTCGTTT
ATCAGTATGG CGGGGGGGCT CTACCTGCAG GGGTTTTCAG GGACACCATC GCAGCCTGGA
GGGCTGGTCT ATGTGCTGGG CTGGACGGGG GGCTTCTGCC TGGTTGGGCT GCTTGTCGCG
CCTTATCTGA GAAAGCTCGA TCTGTACACA GTTCCGGACT ATTTTGGCGT CCGTTTTGGG
GGCCGTTGGC CACGGATGAT TGCGGCTTTT GCGGCGGTTC TGTGTTCTTT TACCTATGTC
GTGGCACAGA TTTACGGCGT AGGATTGATA ACGTCCCGTT TGACTGGTGT TCAGTTTGAA
ATTGGCATTT TGCTGGGGTT GGGCGGCGTT CTTGTGTGCT CGTTTTTAGG CGGCATGCGG
GCTGTAACCT GGACGCAGGT GACTCAGTAT GTTGTACTGA TTCTGGCTTT TTTGATTCCT
GTTTCATGGC TGGCCTACAA ACAATTGGGC AATCCATTGG CGCCGTTTGT TTACGGGCAG
CAACTGCAAA AAATTACGGA ATTGGAACGG CAACTTATCG ATTCGCCGGC CGAGCTGCAG
GTGATCAATG AATACGCCCG GCGAGCGCGG GACTATGAGC GCAAGCTGCA ACACGTGGAA
GCATCGCTTG AGAGTGAACG AAACACGATA AGGGAAAAGA TTCGTTTTCT GAACGAACAT
CGAGTGGATG AATCGATTGT CGTTGCCGCA AGACGTGAGC TTGCGGCGCT GCCAAAGGAC
ACCGTCAGCG CGCGTGAGCG CTGGATGCAT GCGATGCAAG ATAACCTGGA TCGAGCGCAG
CCCTTGGGCG GCATGCCAGC ACACGCCAAA CCATTTGCTG GCGATCCGCA GGGGAGCGCT
GATGAAAAGA AGGCGTTTGA TGTTTCGCGG CGCAACTTTC TGGCATTGAC GTTTTGTCTG
ATGGTGGGGA CCGCTGGTTT GCCTCACTTG CTGACGCGCT TTTATACAAC TCGCACGGTG
GCCGAGGCAC GTACATCCGT CGTCTGGTCG CTTTTTTTTA TTGCGTTGCT GTATTTGTCT
GCCCCCGCCT TGGCCGTGCT GGTGAAATTT GAGGTCATGA GCCAACTGGT CGGGCAGAAC
TTTGATTCAT TGCCCGTGTG GATCGCACAG TGGGCGAAGG TAGACCCGAC GCTGGTGTCT
GTCAGCGATG TCAATGGAGA CCACATTCTC CAGTTTTCAG AGCTCAAACT GGGAGCGGAC
ATTGTGATGC TGGCCACGCC TGAGTTGGGC GGCTTGCCTT ATGTTGTGTC CGGCCTTGTG
GCTGCGGGTG GACTTGCTGC TGCACTCTCA ACGGCGGATG GCTTGTTGTT GACGATTGGA
AATGCGCTGG CACATGATCT TTTCTATCGA GGCGGGAGTA GCCAGTCGGA GGCGGTCAGA
CGGGTCATGT TGTCGAAGTT TGCGCTGTTG CTGGTCGCCC TGGTCGCTGC CTATGTGGCT
GCGCAGCGGC CTGCAGATAT CCTTTATCTT GTCTCGGCTT CTTTCTCTTT GGCTGGGGCC
GCATTTGTAC CGGTGATGGT GTTGGGAATA TTCTGGCGCC GTACGACACG GTTGGCCGCC
GTCGTCGGGA TGATCACAGG TCTTGGACTA ACGATCTACT ACATGGCCGT GAATTCCGTA
GCGCTTAGAT CGGTATTGGG CTTGAGTGGC ACGGGGTTAT GGCTCGATAT TCAGCCTGTT
TCTGCCGGAG TATTTGGCGT TTTGGCGGGT TTTGTGGTCA CTGTGCTGGT CAGTCTTCTG
TCTCGATCAG AATCTTCGTC GCCCGGTTGA
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| Protein sequence | MLNPAVEVGE FKPIPGGFRL HGWLLAIWFA ASFGVVFFAR DLQIIVAGWP LGYWFAAQGS
VFIFIAVVAV FAWVANRRDR EITTADAAYT AYKHRLHWRF SAYVVCLLLF LLALALAERL
GLKKMWVGSI FLFATVALYA VIGIYGRTSD ASEYYVAGRS IPAVYNGMAV AADWMSAASF
ISMAGGLYLQ GFSGTPSQPG GLVYVLGWTG GFCLVGLLVA PYLRKLDLYT VPDYFGVRFG
GRWPRMIAAF AAVLCSFTYV VAQIYGVGLI TSRLTGVQFE IGILLGLGGV LVCSFLGGMR
AVTWTQVTQY VVLILAFLIP VSWLAYKQLG NPLAPFVYGQ QLQKITELER QLIDSPAELQ
VINEYARRAR DYERKLQHVE ASLESERNTI REKIRFLNEH RVDESIVVAA RRELAALPKD
TVSARERWMH AMQDNLDRAQ PLGGMPAHAK PFAGDPQGSA DEKKAFDVSR RNFLALTFCL
MVGTAGLPHL LTRFYTTRTV AEARTSVVWS LFFIALLYLS APALAVLVKF EVMSQLVGQN
FDSLPVWIAQ WAKVDPTLVS VSDVNGDHIL QFSELKLGAD IVMLATPELG GLPYVVSGLV
AAGGLAAALS TADGLLLTIG NALAHDLFYR GGSSQSEAVR RVMLSKFALL LVALVAAYVA
AQRPADILYL VSASFSLAGA AFVPVMVLGI FWRRTTRLAA VVGMITGLGL TIYYMAVNSV
ALRSVLGLSG TGLWLDIQPV SAGVFGVLAG FVVTVLVSLL SRSESSSPG
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