Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2189 |
Symbol | |
ID | 3960989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2387936 |
End bp | 2389144 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917010 |
Product | beta-lactamase |
Protein accession | YP_523444 |
Protein GI | 89900973 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.13371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGACC CTCGCGGCAA GGTGTTACCC GGTCTGTCAC CGGATCAGGT CGGCTTGTGC CCACAGCGCA CGAATCGCGT CATGGCGGTA CTGCAAGCCG AGGTGGATCG CCAGCGCCTG CCCGGCGCCG TTGTTCTGAT TGCCCGGCAC GGCAAGCTGG CCCTGTTTGA CAGTTTGGGC GCGCTGGACC CAGCCACGAA TTCCCCCATG ACGCGGGACG CCATATTCCG CATTTATTCC ATGACCAAGC CCATTGTGTC GGTGGCCGCC ATGATGTTGA TGGAACAGGG GCAACTGTTG TTGAATGACC CGGTGGCCAA ATACCTGCCC GAATACGCGA TGCAGAAGGT GGCCCATCTG GTTGACGGGG CGGTCCAACT GCAAGCCGTG CGACAAGCGG CCACGCTGCA GGACTTGTTG CGGCACACGG CCGGCCTGAC CTATGAATTC ATGGGCAATG CATCGGTGCA GCGGCAGTAC GCGCAAATCA GAATCGGCTC GCGTGGACGC AGCAATGCCG AGCTTTCGCA TCAACTGGCC GCTTTGCCGC TGCTGTTTGA GCCCGGTACC GTATGGGAGT ATGGCCGCGC CACGGATGTA CTGGGGCGCG TGGTGGAAAT AGTCAGCGGC CAGACGCTAG GCGCGTATCT ACAGGACCAC ATTTTCAAGC CGCTGGGTAT GACCGACACC GGGTTTTCCG TGCCACCCGA ACAGCACGCT CGCATTGCCG AACCCTTTGC CCGCGACCCC GAAGGCGGGG TGCAAATGCG GCTGATCGAT GTGCGCGAGA ACGCGGCTCT GGAATCCGGT GGCGGTGGCC TGGCGTCAAC GGCTATGGAT TACGCGCGAT TTTTGCAGTT CATGCTAAAC AAGGGCGAAC TCGACGGCGT GCGCCTGTTG GGGCCCAGAA CGGTCGAATT CATGACCGCG GACCATCTTG GGGAAATCCC TGTGAACAGT GGTGCATCGC GCGCCCTGTT GCCGCCGGGT CATGGTTTCG GGCTGGGTGT TGCGGTCCGC AAGAATCTGG GCGTCGCGTC GGTGCCAGGT TCGGTCGGCA GTTATTTCTG GGGCGGCATG GCAGGCACCA CCTTCTTTGT GGATCCGGCC GAAGACCTGT TTGCCGTTCT AATGCTGCAG GCCCCCAACC AGCGCGAGTA CTACCGTATG CTGTTTCGTG ATCTGGTCTA CGCCACGCTG ATTGATTGA
|
Protein sequence | MVDPRGKVLP GLSPDQVGLC PQRTNRVMAV LQAEVDRQRL PGAVVLIARH GKLALFDSLG ALDPATNSPM TRDAIFRIYS MTKPIVSVAA MMLMEQGQLL LNDPVAKYLP EYAMQKVAHL VDGAVQLQAV RQAATLQDLL RHTAGLTYEF MGNASVQRQY AQIRIGSRGR SNAELSHQLA ALPLLFEPGT VWEYGRATDV LGRVVEIVSG QTLGAYLQDH IFKPLGMTDT GFSVPPEQHA RIAEPFARDP EGGVQMRLID VRENAALESG GGGLASTAMD YARFLQFMLN KGELDGVRLL GPRTVEFMTA DHLGEIPVNS GASRALLPPG HGFGLGVAVR KNLGVASVPG SVGSYFWGGM AGTTFFVDPA EDLFAVLMLQ APNQREYYRM LFRDLVYATL ID
|
| |