Gene Rfer_2181 details

Gene Information

• Locus tag: Rfer_2181
• Symbol: hscA
• ID: 3961310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2378809
• End bp: 2380665
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637917001
• Product: chaperone protein HscA
• Protein accession: YP_523436
• Protein GI: 89900965
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.174221
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTTC TACAAATTTC CGAGCCCGGT CAGACACCCA ATCCGCACCA GCGGCGCATT 
GCGGTAGGCA TTGACTTGGG GACCACCCAT TCACTGGTGG CGTCCGTGCG CCATGGAGTC 
GCTGAATGTT TGCCAGACGC GCAGGGTCGT GTCATCCTGC CTTCAATCGT CCGTTATCTT 
GAAGGGGGTG GACGCCAGAT CGGCTTTGAG GCACAAGCAG CGTCAGCCCT CGATCCTGAA 
AACACCATTG CCTCGGTCAA GCGCTTCATG GGTCGCAGCG CGTGCGATGT GATCGGGCGT 
GAGAAATTGC CGTACCGCTT TGTGGACCAT CCCGGCATGC TGGGTTTGCA CACTGTGCAA 
GGTGAAAAAT CGCCAGTTGA GGTCAGTGCC GATATTTTGG CGACCTTGCG TTACCGCGCA 
GAAGACACTT TCAATGACGA CCTGTATGGC GCGGTGATCA CGGTGCCAGC CTATTTTGAC 
GACGCCCAGC GTCAGGCCAC CAAAGACGCA GCGAAGCTGG CGGGTCTGAA TGTGCTGCGC 
CTGATCAATG AACCCACAGC TGCTGCGATT GCCTATGGGC TCGATAACGC CAGCGAGGGC 
GTTTATGCCA TTTATGACCT TGGTGGTGGG ACCTTTGACA TTTCCATCTT GCGGCTGACA 
AAAGGTGTAT TTGAAGTGCT GGCGACCGGT GGCGACTCGG CTCTGGGTGG TGATGATTAC 
GACCGCGCAC TGGCCGATTG GATCCTGACT CAGGCTGGTG TTCGCGCCAA AACACCGCAG 
GACAAGGCGA TTGCCATCAT CGCGGCGCGC GCTTGCAAGG AAGAACTTTC GGCGACGCAT 
TGTGCCGCCT GCCACGCCTG TATTGGCGGC GAGAACGTTA AATTTGAGGT GGTCGGCGAG 
CAATTTGAAA AGCTGACGGC AGAGCTGACA CAACGCACCA TGCGAGCGGT GCGCAAGACG 
CTGCGCGATG CCAATCTTGA CAAGAACGAT GTCAAGGGTG TGGTCATGGT GGGCGGCTCC 
ACCCGCATGC CACAGATTCA GCGAGCCGTT GCTGATTTTT TTGGTCGAGT GCCCCTCACC 
AACCTCAACC CCGATGAAGT GGTTGCGCTT GGCGCCGCCA TACAGGCCAA CCAGTTGGCA 
GGCAATAACG CCGGTGGCGA CTTGCTGTTG CTCGATGTCA TTCCCTTGTC GCTTGGCATC 
GAGACCATGG GTGGTCTGGT TGAGCGGATT GTGCCCCGCA ATGAGACCAT TCCGACCGCA 
AAAGCGCAGG ATTTCACCAC CTACAAGGAC GGCCAAACCG CGCTGGCGTT GCACGTGGTG 
CAGGGTGAAC GTGACCTGGT GGCAGATTGC CGGAGCCTGG CGCGTTTTGA GTTGCGTGGC 
ATCCCACCCA TGGCCGCAGG CGCCGCGCGT ATCCGCGTCA CCTTCACGGT TGATGCCGAT 
GGGCTCTTGA GCGTCAGTGC GCGCGAGCAG CTGAGCGGCG TTGAAGCCCG AATTGATGTC 
AAACCCTCTT ACGGACTGGG TGACGAGCAG ATTGCCAACA TGTTGCAAGA CAGTTTCACC 
AAGGCCGATG TGGACATGAA AGCCCGTGCC CTTGTCGAGG CCCGCGTCGA TGCCGAACGT 
ATGGTACTGG CGACGCAAAG CGCGCTGGAT GCGGATGGTG ACCTGCTCAC CGAGTTGGAT 
CGTGCCGGCA TTGATCGGCT GATGGTTGCC GTGCATGTGA CAAGCCTCCT GGAAGATCCG 
GCCCGGATTG AAGCGGCGAC GCAGGCGCTG GCCAAAGGCA CTGAGGCCTT TGCGGCAATG 
CGGATGAATA GGGGCATACA AAAAGCATTG GCTGGGAAAA ACATCGCAAC GGTCTGA 

 

Protein sequence

MALLQISEPG QTPNPHQRRI AVGIDLGTTH SLVASVRHGV AECLPDAQGR VILPSIVRYL 
EGGGRQIGFE AQAASALDPE NTIASVKRFM GRSACDVIGR EKLPYRFVDH PGMLGLHTVQ 
GEKSPVEVSA DILATLRYRA EDTFNDDLYG AVITVPAYFD DAQRQATKDA AKLAGLNVLR 
LINEPTAAAI AYGLDNASEG VYAIYDLGGG TFDISILRLT KGVFEVLATG GDSALGGDDY 
DRALADWILT QAGVRAKTPQ DKAIAIIAAR ACKEELSATH CAACHACIGG ENVKFEVVGE 
QFEKLTAELT QRTMRAVRKT LRDANLDKND VKGVVMVGGS TRMPQIQRAV ADFFGRVPLT 
NLNPDEVVAL GAAIQANQLA GNNAGGDLLL LDVIPLSLGI ETMGGLVERI VPRNETIPTA 
KAQDFTTYKD GQTALALHVV QGERDLVADC RSLARFELRG IPPMAAGAAR IRVTFTVDAD 
GLLSVSAREQ LSGVEARIDV KPSYGLGDEQ IANMLQDSFT KADVDMKARA LVEARVDAER 
MVLATQSALD ADGDLLTELD RAGIDRLMVA VHVTSLLEDP ARIEAATQAL AKGTEAFAAM 
RMNRGIQKAL AGKNIATV