Gene Rfer_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2180 
Symbol 
ID3961309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2378250 
End bp2378783 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content56% 
IMG OID637917000 
Productco-chaperone Hsc20 
Protein accessionYP_523435 
Protein GI89900964 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00471531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCTCC AATCCAACGA TTTCGAACTG TTTGGTCTCG CGCTTCAATT TGCGCAAGAC 
CGTGTTGCGA TTGACGCACG CTGGAAAGAC TTGCAGCGCG AAGCGCACCC CGATAAGTTC
GCCGCGCAAG GGGCTGCCGC GCAGCGTGTG GCCATGCAGT GGTCGGTGCG TATCAACGAG
GCTTACCAGC GGCTCAAAGC CCCGCTCAAA CGCGCGGCTT ACTTGTGTGA ACTGCGTGGT
GCGGCGGTGA ATGCCGAGAA CAACACCTCG ATGCCGCCTG AGTTTTTGAT GCAGCAAATG
GACTGGCGCG AAGCGCTCGA TGATGCCAAC AGCCTTGAAG ATTTAGATGA TTTAGGCCTC
CAGGTCAAGC TGGCTATGCG TGACGGGCTA TCTAAATGCG AGCGATTTCT GGATCATCAA
CACGACTATT TGCAGGCCGC GCAACAGGTG AGGGCGTTGA TGTTCATCGA GCGCTTTGAG
CGTGATGTGC AAGCCCGCCT CGATCAGATG GAAACCGTGG AGCGAGGACA ATAG
 
Protein sequence
MNLQSNDFEL FGLALQFAQD RVAIDARWKD LQREAHPDKF AAQGAAAQRV AMQWSVRINE 
AYQRLKAPLK RAAYLCELRG AAVNAENNTS MPPEFLMQQM DWREALDDAN SLEDLDDLGL
QVKLAMRDGL SKCERFLDHQ HDYLQAAQQV RALMFIERFE RDVQARLDQM ETVERGQ