Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2180 |
Symbol | |
ID | 3961309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2378250 |
End bp | 2378783 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917000 |
Product | co-chaperone Hsc20 |
Protein accession | YP_523435 |
Protein GI | 89900964 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00471531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCTCC AATCCAACGA TTTCGAACTG TTTGGTCTCG CGCTTCAATT TGCGCAAGAC CGTGTTGCGA TTGACGCACG CTGGAAAGAC TTGCAGCGCG AAGCGCACCC CGATAAGTTC GCCGCGCAAG GGGCTGCCGC GCAGCGTGTG GCCATGCAGT GGTCGGTGCG TATCAACGAG GCTTACCAGC GGCTCAAAGC CCCGCTCAAA CGCGCGGCTT ACTTGTGTGA ACTGCGTGGT GCGGCGGTGA ATGCCGAGAA CAACACCTCG ATGCCGCCTG AGTTTTTGAT GCAGCAAATG GACTGGCGCG AAGCGCTCGA TGATGCCAAC AGCCTTGAAG ATTTAGATGA TTTAGGCCTC CAGGTCAAGC TGGCTATGCG TGACGGGCTA TCTAAATGCG AGCGATTTCT GGATCATCAA CACGACTATT TGCAGGCCGC GCAACAGGTG AGGGCGTTGA TGTTCATCGA GCGCTTTGAG CGTGATGTGC AAGCCCGCCT CGATCAGATG GAAACCGTGG AGCGAGGACA ATAG
|
Protein sequence | MNLQSNDFEL FGLALQFAQD RVAIDARWKD LQREAHPDKF AAQGAAAQRV AMQWSVRINE AYQRLKAPLK RAAYLCELRG AAVNAENNTS MPPEFLMQQM DWREALDDAN SLEDLDDLGL QVKLAMRDGL SKCERFLDHQ HDYLQAAQQV RALMFIERFE RDVQARLDQM ETVERGQ
|
| |