| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2175 |
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| Symbol | |
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| ID | 3961304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2373430 |
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| End bp | 2375562 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637916995 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_523430 |
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| Protein GI | 89900959 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00395254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTAC CCACTCCCGC CGCTCTTGTT ACGTCCTCTG ATGCCGAGCC GGTTCGCTCC
GGCACCTTTG TACGCTACCC CGACTCACCC TTTGAGCTGT ATCAGCCGTA CCCACCCGCT
GGCGACCAAC CAGAGGCCAT CAACCAACTG GTGGAAGGCG TCAATGACGG TGAGGTGTTT
CAAATCTTGC TGGGCGTCAC CGGCTCGGGC AAAACCTTCA CCATGGCCAA TGTGATTGCC
AGACTGGGGC GGCCCGCCAT TGTGTTTGCG CCCAACAAAA CACTGGCGGC GCAGTTGTAC
AGCGAGTTCC GTGAGTTTTT TCCCAAGAAT GCTGTGGAGT ACTTCGTCAG TTATTACGAC
TACTACCAGC CCGAGGCCTA TGTGCCGCAG CGCGATTTGT TCATTGAAAA AGACTCGGCC
ATCAACGAGC ACATCGAACA AATGCGCTTG AGCTGTACCA AAAGCGTGCT GGAGCGCCGC
GACGTGGTGA TTGTGGCCAC GGTGTCGGCC ATCTACGGCA TTGGCCAGCC CGAGGCGTAT
CACAAAATGG TGATGACGCT GCGGGTGGGC GACAAGCTGG GCCAGCGCGA CATGATTGCC
CAACTGGTGC GCATGCAGTA CCAGCGCAAC GATGTGGATT TTTCACGCGG GGCGTTTCGG
GTGCGCGGTG ACACCATTGA TATTTTTCCG GCCGAGCACA GCGAGATGGC GATCCGGGTC
GAGCTGTTTG ACGACGAGAT CGAGTCACTG CAGCTGTTTG ACCCACTCAC CGGGCGCATC
CGGCAAAAAA TACCGCGCTT TACCGTCTAC CCCAGCAGTC ATTACGTGAC CCCGCGCGAG
CAGGTGCTGT CTGCGGTGGA GGCGATCAAG ATCGAGTTGG CAGAACGCAT CAAGGAGTTT
GTTGGCCAGG GCAAGCTGGT GGAGGCGCAG CGCATTGAGC AGCGCACGCG GTTTGATCTG
GAGATGCTCA GCGAGGTGGG GCATTGCAAG GGCATTGAAA ACTATTCTCG GCACCTGAGC
GGTGCCGCCC CCGGTGAGCC GCCTGCCACG TTGACAGATT ACCTGCCGAA AGACGCGCTG
ATGTTTCTGG ACGAAAGCCA TGTGCTGATC GGCCAGTTTG GTGCCATGTA CAACGGCGAC
CGCTCGCGCA AGACCACGCT GGTTGAATAC GGTTTCAGGC TGCCCAGCGC GTTGGATAAC
CGACCGCTCA AGTTTGAAGA GTTCGAGACC CGCATGCGCC AGGCCATTTT TGTCTCCGCC
ACGCCCGCGC AATGGGAAAA AGACCATGCC GGAAAAATTG TTGAACAACT GGTGCGCCCG
ACCGGCCTGG TTGACCCTGA AGTGGAAGTG CGTCCGGCGG TGAATCAGGT GGATGATGTG
CTGCAAGAAA TCCGCATTCG TGTCGAAAAA CATGAGCGCG TGTTGATCAC CACGCTGACC
AAGCGCATGG CCGAACAGCT GACCGATTAT TTGAGTGACA ACGGGGTCAA GGTGCGCTAC
CTGCACAGCG ACATCGACAC CGTGGAGCGG GTCGAAATTT TGCGCGACCT GCGTTTGGGC
ACGTTTGATG TGCTGGTGGG TATCAACCTG CTGCGCGAGG GACTGGATAT TCCCGAGGTG
TCGCTGGTAG CGATTCTGGA TGCCGATAAA GAAGGCTTTT TGCGCTCCGA GCGCTCCCTG
ATCCAGACCA TTGGTCGTGC TGCCCGCAAT CTGGAGGGAC GTGCGATTTT GTATGCCGAT
AAGGTGACCG AGTCGATGAG AAAAGCGATT GGCGAGACTG AGCGCCGTCG TGTCAAACAG
GTGACGCACA ACCTGGCGAT GGGAATCACA CCACGCTCCA TCGTGAAGCA GGTGAAAGAT
CTGATCGACG GTGTTTACAG CGAAAAAGCC GGCCAAGAGG CAGAAAAGCT GGAGCGCGAC
GCGATGCAGC GTGCTCAGGT GGAAGACATG AGCGAGAAAG ACATCTCCCG CGAGATCAAG
AGGCTGGAAA AACTGATGAT GGAACACGCG CGCAACCTGG AGTTCGAAAA GGCGGCGCGG
GTGCGCGATC AGCTGGGTAT TTTGAAGGAA CAGGCCTTTG GCGCAGCGGG CAGGGACAAC
GTGGTGGTTA TTGCTGCAGG AACAAAAGAC TAA
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| Protein sequence | MTVPTPAALV TSSDAEPVRS GTFVRYPDSP FELYQPYPPA GDQPEAINQL VEGVNDGEVF
QILLGVTGSG KTFTMANVIA RLGRPAIVFA PNKTLAAQLY SEFREFFPKN AVEYFVSYYD
YYQPEAYVPQ RDLFIEKDSA INEHIEQMRL SCTKSVLERR DVVIVATVSA IYGIGQPEAY
HKMVMTLRVG DKLGQRDMIA QLVRMQYQRN DVDFSRGAFR VRGDTIDIFP AEHSEMAIRV
ELFDDEIESL QLFDPLTGRI RQKIPRFTVY PSSHYVTPRE QVLSAVEAIK IELAERIKEF
VGQGKLVEAQ RIEQRTRFDL EMLSEVGHCK GIENYSRHLS GAAPGEPPAT LTDYLPKDAL
MFLDESHVLI GQFGAMYNGD RSRKTTLVEY GFRLPSALDN RPLKFEEFET RMRQAIFVSA
TPAQWEKDHA GKIVEQLVRP TGLVDPEVEV RPAVNQVDDV LQEIRIRVEK HERVLITTLT
KRMAEQLTDY LSDNGVKVRY LHSDIDTVER VEILRDLRLG TFDVLVGINL LREGLDIPEV
SLVAILDADK EGFLRSERSL IQTIGRAARN LEGRAILYAD KVTESMRKAI GETERRRVKQ
VTHNLAMGIT PRSIVKQVKD LIDGVYSEKA GQEAEKLERD AMQRAQVEDM SEKDISREIK
RLEKLMMEHA RNLEFEKAAR VRDQLGILKE QAFGAAGRDN VVVIAAGTKD
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