Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2171 |
Symbol | |
ID | 3961300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2368536 |
End bp | 2370197 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916991 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_523426 |
Protein GI | 89900955 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAT ACGTATTTTC CATGAACCAC CTCGGCAAGA TTGTTCCGCC GAAAAAGTTC ATTCTCAAAG ACATTTCCCT CAGCTTTTTC CCCGGCGCCA AAATTGGCGT GCTGGGCACC AATGGCTCCG GCAAGTCCAC CCTGCTAAAA ATCATGGCCG GGGTCGACAA GGAGTTTGAA GGCGAAGCCA TTCCCATGGC CGGTCTGAAC ATTGGCTACT TGCCGCAAGA GCCGCAACTG GACCCCGAAC AGACGGTACG TGAAAGCGTG GAAGCCGGCA TGGGTGATGT GTTCAAAGCC AAAGCCCGGC TGGAAGAAAT TTACGCCGCT TACGGCGACG AAGATGCCGA CTTCGACGCT CTGGCTGAAG AACAAGCCCG GATGGAAGCC ATCATTGGCA GCACGGGCGC GGATACGGAG CACCAACTTG AAATAGCGGC TGACGCGCTG CGGCTGCCTC CGTGGGAGGC GAGGGTCGGC GTGCTCTCCG GGGGCGAAAA GCGCCGGGTC GCCCTGTGCC GCCTGCTGCT GTCCAAGCCG GACATGCTGC TGCTCGATGA GCCTACCAAT CACCTGGATG CCGAATCGGT GGACTGGCTG GAACAGTTCT TGAAGCGCTA TCCCGGCACC GTGGTGGCCA TCACCCATGA CCGCTATTTT CTGGACAACG CCGCCGAGTG GATTCTGGAG CTCGACCGGG GCAATGGCAT GCCTTACAAA GGCAACTACA GCGCGTGGTT GGAGCAAAAG CAGGAGCGCC TGTCGCAAGA GCAAAAGGGC GAAGAATCTC GTGCCAAGGC ACTCAAGAAA GAGCTTGAAT GGTCACGCCA GAACCCCAAG GCACGCCAAG CCAAGAGCAA GGCCCGTTTG GCCCGCTTTG AAGAGCTGTC TGACTTTGAA TATCAGAAAC GCAACGAAAC CAACGAAATC TTCATCCCCG TCGCTGACCG CCTCGGGAAC GAAGTGATTG AATTTGTCAA TGTCAGCAAG TCGTTTGGCG ACCGCATGCT TATCGATAAC CTGAGCTTCA AGGTGCCACC GGGTGCCATC GTCGGCATTA TTGGCCCCAA CGGTGCCGGT AAATCGACCT TGTTCCGCAT GATCGCGGGC AAGGAAAAAC CCGACAGTGG CGAGGTCAAG ATTGGCTCCA CCGTCAAGAT GGCATTTGTC GACCAGCACC GGGATGACTT GTCGAACGAA AAAACCGTCT GGGAAGACGT GTCCGGCGGG CTTGACATTC TGAACGTGGG CAAGTTCCAG ATGGCCAGCC GCGCGTATTG CGGACGTTTC AATTTCAACG GCGCGGACCA GCAAAAACGC GTGGGAACAC TGTCGGGTGG TGAGCGCGGG CGACTGCATT TGGCCAAGAC CCTGATTGCT GGCGGCAATG TGTTGATGCT CGATGAGCCT TCCAACGACC TGGATGTGGA AACTTTGCGG GCGTTGGAAG ACGCCTTGCT GGAGTTCGCC GGCTCCATCA TGGTCATCAG CCATGACCGC TGGTTCCTGG ACCGTATTGC CACCCACATT TTGGCTTGCG AAGGCGACAG CCAGTGGACC TTCTTTGATG GCAACTACCA GGAATATGAA GCCGACAAGC GCAAACGCCT CGGTGAAGAG GGCGCCAAAC CGCATCGCAT GCGGTTCAAA GCCCTCAAAT AA
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Protein sequence | MAQYVFSMNH LGKIVPPKKF ILKDISLSFF PGAKIGVLGT NGSGKSTLLK IMAGVDKEFE GEAIPMAGLN IGYLPQEPQL DPEQTVRESV EAGMGDVFKA KARLEEIYAA YGDEDADFDA LAEEQARMEA IIGSTGADTE HQLEIAADAL RLPPWEARVG VLSGGEKRRV ALCRLLLSKP DMLLLDEPTN HLDAESVDWL EQFLKRYPGT VVAITHDRYF LDNAAEWILE LDRGNGMPYK GNYSAWLEQK QERLSQEQKG EESRAKALKK ELEWSRQNPK ARQAKSKARL ARFEELSDFE YQKRNETNEI FIPVADRLGN EVIEFVNVSK SFGDRMLIDN LSFKVPPGAI VGIIGPNGAG KSTLFRMIAG KEKPDSGEVK IGSTVKMAFV DQHRDDLSNE KTVWEDVSGG LDILNVGKFQ MASRAYCGRF NFNGADQQKR VGTLSGGERG RLHLAKTLIA GGNVLMLDEP SNDLDVETLR ALEDALLEFA GSIMVISHDR WFLDRIATHI LACEGDSQWT FFDGNYQEYE ADKRKRLGEE GAKPHRMRFK ALK
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