| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2163 |
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| Symbol | |
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| ID | 3961292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2357346 |
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| End bp | 2359577 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916983 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_523418 |
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| Protein GI | 89900947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.796905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTCT CTTTACGCTT CGTTCTGCCA CTGCTGCTGG TGCTGGCGGG CATTGCCTAC
GCCGTCGCGC CTCTGATCGA CCGATTGACG CTGAGCTGGT TTGTGCGCGA TCTCGACAGC
CGCTCATCGT TGATAGCCAG CACCTTTCAG GAACCGCTGC AGGAGCAACT CGCTGCTGGC
AAGAAGGCAA AAATTACAGA ATTCTTCAAC CGCGTCACGC AGGATGAACG GATTTTCGCG
GTGGGGTACT GCGCCACGCC CACGGCCCCG ATGTTGGCCA GCTACCAGCT TCCGGCGCAG
ATTCGTTGTG ACAATCTTGA CCGCTGGAAC GCCCCGAGCG ATCACCTGTT ACCAAGCGCC
CAGGGACCAT TGCACGTGGC AGTGAAACCC ATGGGCACTG AGGCCGTACC GACCGGTCAG
CTGGTTGTGG TGCACGACAT GAGCTTCATC ACCCGGCGCA GCGAAGAAAC CAAACGCTAC
CTCTTCTATG TCTTTATGGC ATTGGGGGCG GCAGTCTCGC TGATCACGGT GATCGTGGCC
CAGCTCTCAT GGCGCGGCTG GATGGCCGGT GTGCGCGCTC TGCTGCGGGG CGAGGGGCTG
CTGCGCCGGC CTGAAATCAG CGCCCCACCC GACCTGCCCG GCTTCAAGCC GATTGCACGC
GACCTGCAAC GCCTCATCAG CGAATTGGAG GCCGAGACCC GAGCTCGCGA TGAAAGCCAG
CTCACCTGGA CGGCGGAGAC CCTGCGTACC ATTTTGCATG GCGAACTGCG TGGCGAGGAC
GTGATTGTGG TGTCCAACCG CGAACCCTAC ATCCACCAAC GCCGCGGTGA GCGCATCGAG
GTGCATCGCC CCGCGAGCGG CCTGGTGACA GCGCTGGAGC CGATCATGCG CGCCTGCTCG
GGCACCTGGG TTGCACACGG CAGTGGCTCG GCCGACGCGG AGGTGGTTGA CAAAAACGAC
CGCGTAGCCG TGCCACCCGA AAACCCCGCA TACCATATTC GCCGTGTCTG GCTGACGCCT
GAGGAAGAAG CGGGCTACTA CTACGGTTTC TCCAATGAGG GACTTTGGCC CCTGTGCCAC
ATCGCCCACG TTCGGCCTAT TTTCCGCTCC AGCGACTGGA CGCAATACGT AGCGGTTAAC
CGCAAGTTTG CCAAGGCGGT GGTGAGTGAG GCCAAGACCA AAAACCCGAT TGTGCTGGTG
CAGGACTACC ACTTTGCGCT GTTGCCCAAG ATGATCCACG ACGAGCTGCC TGATGCCACC
ATCATCAGCT TCTGGCACAT CCCCTGGCCT AACCCCGAAT CGTTTGCCAT TTGCCCATGG
CGTGAGGAGA TATTGGCGGG CATGCTGGGC AGCAGCATCA TGGGTTTTCA CACCCAGTCC
CATTGCAACA ATTTTGTTGA TACGGTGGAC CGCTTTCTGG AAGCGCGGGT CGACCGCGAA
TCGTTCAATG TCTCTTTTGG GGGCAAACTC ACCGCCGTGC GGCGTTACCC GATTTCCATC
GCCTGGCCAC CGGACCCGGA ACTGCTGCAA AAGACCGTGC CCGATTGCCG CAGCCACATT
CGCCAGCTCA ACGACTTGCC ACCCGAACAC AAGCTGGGCA TCGGCGTTGA CCGTCTGGAT
TACACCAAAG GCATCTTGGA GCGCTTTCGG GCCATTGAAC GTCTGCTGGA GTTGAATCCG
AACTGGATCG GCCACTTCAC GTTTGTTCAG ATTGCCGCAC CGACACGCAC AGGCATCGAC
GAGTACCAGC ACCACGAGGC GCAGGTGCGT GCCCTGGCAG CGCGCATCAA TGCGCGCTTT
AGGAGCCGCG GACCCGCCCC CATCCTGCTG AAGATTGAGC AGCACGCGCC ACCGCAGGTC
TACGAATATT TCCGCGCCGC TGATCTGTGC TTTGTCAGCA GCCTGCACGA TGGCATGAAC
CTGGTGGCCA AAGAGTTCGT CGCCGCCCGC GACGATGAAC GCGGTGTCTT GGTACTGTCC
GAATTCACCG GGGCCGCAAG GGAGTTGCCC GAAGCCCTGA CCGTCAACCC GTACGATGCC
GACCAGTGCG CGGCTGCCCT GCACCTGGCG TTGAGCATGC CCGAGGCCGA GCAGCGCGAC
CGTATGCGAC TCATGCGCGG TCTGGTGGCC GAATTCAACG TCTTCCGCTG GGCCGGGCGC
ATGCTGCTCG ATGCCGCCAC CAAACGTCGG CGCAGTCGGG TGACTGATCA GCCAGGCACG
TCGCCCCTGT GA
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| Protein sequence | MRLSLRFVLP LLLVLAGIAY AVAPLIDRLT LSWFVRDLDS RSSLIASTFQ EPLQEQLAAG
KKAKITEFFN RVTQDERIFA VGYCATPTAP MLASYQLPAQ IRCDNLDRWN APSDHLLPSA
QGPLHVAVKP MGTEAVPTGQ LVVVHDMSFI TRRSEETKRY LFYVFMALGA AVSLITVIVA
QLSWRGWMAG VRALLRGEGL LRRPEISAPP DLPGFKPIAR DLQRLISELE AETRARDESQ
LTWTAETLRT ILHGELRGED VIVVSNREPY IHQRRGERIE VHRPASGLVT ALEPIMRACS
GTWVAHGSGS ADAEVVDKND RVAVPPENPA YHIRRVWLTP EEEAGYYYGF SNEGLWPLCH
IAHVRPIFRS SDWTQYVAVN RKFAKAVVSE AKTKNPIVLV QDYHFALLPK MIHDELPDAT
IISFWHIPWP NPESFAICPW REEILAGMLG SSIMGFHTQS HCNNFVDTVD RFLEARVDRE
SFNVSFGGKL TAVRRYPISI AWPPDPELLQ KTVPDCRSHI RQLNDLPPEH KLGIGVDRLD
YTKGILERFR AIERLLELNP NWIGHFTFVQ IAAPTRTGID EYQHHEAQVR ALAARINARF
RSRGPAPILL KIEQHAPPQV YEYFRAADLC FVSSLHDGMN LVAKEFVAAR DDERGVLVLS
EFTGAARELP EALTVNPYDA DQCAAALHLA LSMPEAEQRD RMRLMRGLVA EFNVFRWAGR
MLLDAATKRR RSRVTDQPGT SPL
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