Gene Rfer_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2156 
Symbol 
ID3961207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2340122 
End bp2345233 
Gene Length5112 bp 
Protein Length1703 aa 
Translation table11 
GC content66% 
IMG OID637916976 
Productputative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase 
Protein accessionYP_523411 
Protein GI89900940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1640] 4-alpha-glucanotransferase
[COG3280] Maltooligosyl trehalose synthase 
TIGRFAM ID[TIGR00217] 4-alpha-glucanotransferase
[TIGR02401] malto-oligosyltrehalose synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.57322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAGCC CGTGGACCGA GCACAACGCG CAGCCGTTGA ATCAACTGTG CGCACACTTT 
GGCATTGCCA CTGACTACGA TGACATCTGG GGCACGCGCC ACCCGGTAGC ACACGCGAGC
TTGCTGGCCC TGCTGTCGGA TTTCGGCGTC ACACTGGCTG ACGAATCGGA CACGCCTGAC
GCACTCGATG CCGTGCTGCG CTGTGCCTGG CGCCAGGCCC TGCCGCCAGT GGTGACAATT
CAGGCGTCGG CGCCGGCGTG GGACGTGTCA CTGCGCCTGC CCGCCTCGCT GACCCACATC
CGCTGGCAAC TGCGCGACGA AACCGGTACC TTGCACCAGG GCGAGGTCGC CGCCGATGCG
CTGCCCGAGA TCGCCCGCAC CGAACTCGAC GGTGTCGCCT GGTGCGAGCG CCAGCTGTCT
TTCAGCTTGC GATTGGCCGC TGGCTACCAT CGCCTGAGCG TGGCGGACCT GGCCGGCGAG
ACCCTGGTGA TCAGCGCGCC CGAGCGTTGC TATCGTCCGG CAGCGCTGCA AAACGGCGGC
AAAGTCTGGG GACCGACCGT ACAACTGTAT GCGCTGCGCT CCCGGCGCAA TTGGGGCATT
GGCGACTTCA GCGATCTGGC GCAGCTGGTC GGACAGATGG CCGAACGCGG TGCCGACATC
ATTGGACTCA GCCCCTTGCA CGCGCTGTTC GTGCATAACC CGGCCCATGC CAGCCCTTAC
AGCCCCTCCT CGCGCCTGCA GCTCAACGTG CTGTACATCG ATGTCGATGC GGTCGATGAC
TACGCCAGCT GTGAAGCGCT GGGACGGCTT GTCCATTCCG CCGAATTCCA GGGCCGGCTG
GCGCGCTTGC GCGAGGCGCC ACTGGTCGAC TATGTTGGGG TTGCCGCAGT CAAATTCGAG
GCGCTCGAAT TGCTGTTCAG TCATTTCCGA GAACACCATC TGACCCCCGA CGGTCTGCAG
GCGGGCGACG ACGCCGGACG CACCTTTCTC GCGTTCGTGG TGCAGGGCGG CGAAGCGTTG
TACCGCCATG CCCTCTTTGA AGCGCTGCAG GCGCATTTCC ATGCCAACGA TGCCACCATT
GGCGGTTGGC CGGGATGGCC GCTGGCGTAC CAGGATCCCG ACAGTCCTGA GGTGAAATCC
TTCGCGGAGC AACACGCCGA GCGTGTGCGG TACCACCTGT ACCTGCAATG GTTGGCGGCC
AGCCAATTGG CACGCGCGAG CGACCACTGC CAGGCGCTGG GAATGGGTGT GGGCCTGTAT
GTTGACCTCG CCGTCTCGGT CGATCGAGCG GGCTCCGATG TCTGGTGCGA GCGCGCGTGC
TTTGCCGCGG ATGCCAGCAT CGGCGCCCCG CCCGATGAGT TCAATCCGAA TGGCCAGGGC
TGGGGCTTGC CGCCGCTGCG GCCGGACCGC CTGCGCGCCA GCCAGTATCG GTACTTCATC
GACACCTTGC GCGCCAATAT GCGCGGTGCG GGCGCGCTGC GCATTGACCA TGTGATGGGC
TTGATGCGCC TGTTCTGGCT ACCCCCTGGG CAGACCGCGC GCGAAGGCAC TTACGTGCAT
TACGCGCTGG ACGAGATGCT GGCCATCGTG GCATTGGAGA GCCAGCGTAA CCGCTGCATG
GTGATCGGTG AAGACCTGGG CACCGTGGCC GGCGAGGTGC GTTCGGCGCT GGCGCGTTTT
GACGTGCTGT CCTATCGCCT GCTGTACTTC GAACGCCAGG ACAATGGCGA ATTCAAACCG
GCGACCGACT ACCCGGCGAA TGCGCTGGTG GCCGTCAGCA CGCACGACCT GGCGACACTG
GCCGGCTGGT GGTGGGGGCT GGACTTGCGC CTGCGCCTGC AGCTCGGCCT GTTCCCCGAC
CTGCAGGTCT TCGAGAACCA ATTGCTCGAC CGCGCCCAGG AGCGCGTGCG GCTCCTGTCA
GCGCTGCACC GCGCCGGCCT GTTGTCGGCG GCCGAAGTGG CCGATGCGCT GGCCGGGCCG
GACCTGTCGG CGCACGCCGT GCAAGCGGTG CACGCGTTTC TGGCGGCGAC GCCGTGCGCG
CTCATGACCG TCCAGCTCGA GGACGCGCTC GGCGTAGCGG AGCAAATCAA CATGCCCGGC
ACCACCGATG AGCAACCCAA CTGGCGGCGC AAGCTGCCGC TGGACCTGGC CGCACTGGCC
ACCCACGAGG TGATGCTGAG TCTGGGCCGT ACCCTGTCCG GGCTGCGGCC ACGCTGGTCC
GGTGGGGCCT CCAACCGCAG CCGTGCCCGG GCGACGGTGC CGCGCGCCAC CTACCGGCTT
CAGTTCCACA AAGATTTCAC CTTCATGGAT GCCATCCGCA TCCTGCCCTA CCTCGCGCGC
CTGGGTGTGA GTCATGTTTA CTGCTCGCCG ATCCAGCGGG CGCGCGCCGG CAGCATGCAC
GGCTACGACG TGGTGGATCA CAGTGAGGTC AACCCCGAGC TGGGCGGACG CGAAGGCTTC
GAGCGCTTCG CCGCAGCCTT GCTTGAACGC GGCATGGGCA TGTTGCTCGA CATGGTGCCC
AACCACATGG GCGTCATGGG CGGTGACAAC GCCTGGTGGA TGGACGTGCT GGAGAACGGG
CCGGCCTCGC TTTATGCCCA GCACTTCGAC ATCGACTGGC AGCCGCTCAA CCCCGAACTC
ACCGGCAAAG TGCTGCTCCC GGTGCTGAGC GACCACTATG GCGACGTCCT CATGAGTGGC
AACATCGTGC TGCACTTTGA AGACAGCACG GGCAGCCTGG CGCTGCGTTA CTTTGACCAT
TGTTTTCCGC TGGCGCCCGA GAGCTACCCG CAGGTCTTGA TGCTGGCGCA GGCGCGGCTC
GGTGATGTGG ACCTGGCCGC CAGCCTGGCC AGCACGGCCA CCGCTTTCGG TCACCTGCCC
GGACGCGACG CCAGCGACCC CGGCGCGCGC ACTGAGCGCG CGCGTGACAA GGAACTGCTC
AAGACCCGCC TGGCGCGGCT GGCGGCGCGC CAGGCGAGCG TGGCGCAGGC CATCGCCAGC
GCGGTGGCGG AACTCAATCT GGCGGGCGCC CGCGACGCGC TGCATGCGCT GATCGAAGCC
CAGGCCTACC GGCTCGCCTA CTGGCGCGTC GCCGTCGACG AGATCAACTA CCGGCGCTTC
TTCGACATCA ATGAGCTCGC CGCCCTGCGC ATGGAGCGCG AAGACGTGTT CGAAGCCACG
CAGTCGTTCG CGCTGGACCT CGCGGCAGCC GGCCTGGTGG ATGGGCTGCG CATCGATCAT
CCGGATGGGC TGTATGATCC GGCACGTTAT TTCCAGCAGT TGCAGGAGGG CTACGCGCGA
CGCGCCGGCC TGCTGCTGGA AGGCCCGGAC GAGCAGGGTC GGCCAGCGCG ACCGCTGTAT
GTCGTGGCGG AAAAAATCGC CGCGCTCCAC GAGGAGATTC CGCTGGACTG GCACATCCAC
GGCATGACCG GCTACCGTTT TGCCAACTCG GTCAACGGGC TGCTGGTTGA CCCCTCGGCG
GCGGCCAAAT TCGCGCTGAT CTGGCGCAAC TTCACCGCAA TCAGCGAGAG TTTCGACGAG
TTGGCCTATG CCGGCAAGCG CGACATCATT CGCACGTCGC TGGCCTCCGA ACTCAATGTC
CTGTCAACCG AACTGCTGCG CATCGCCCGC GCCGACCGGC GCACCCGCGA CTACACACTC
AATGCGCTGC GCCGCGCCTT GACCGAGGTG GCCGCCTGCC TGCCGGTCTA TCGCACCTAC
TTCATTGACC AGGCCTCGGC GCAGGACCAG CGCTATGTGG ACTGGGCCGT GCGTGATGCC
GAGCACCACA GCCAGGACGC CGACCTGTCG ATCTTCGGCT TCGTGCGCCA GACCCTGCTC
GGGCAGGCGC TGCCCGATGC CTCGGACAGC CTGCGCCAGC GCGTGCGCCG CTTCGCCAAC
CGGTTCCAGC AATTCAGTGC GCCGGTGGCG GCCAAGGGCG TCGAGGACAC CGCTTTTTAC
CGCTATTTCC CCTTGTGTTC TCTCAACGAA GTCGGCGGCG ACCCAAGCCG TTTCGGCGTC
ACGGTGGCCG CCTTCCACGC CGACAACGCC ACAAGAGCAG AGCACTGGCC GCACAACATG
CTGGCCACAT CCACCCACGA CAACAAGCGC TCGGAGGACG TGCGTAATCG CATCAACGTG
CTGTCCGAAA TGCCGGCGCG CTGGCGCCTG GCCTTGCGCC GCTGGCGCAG CCAGCACCGC
GGCCTGCGCC ACAAGCTGGA GGCGGCCAGT GCAGCAGTGG GGGCGCCCTC GCACGCCGAC
GAGTACCTGC TGTACCAGAC GCTCCTGGGC ACGCTGCCCG TGGGCGACTT GAACGAGACG
ACGCTGGCGC CCTACCGCGA ACGCGTGGTG CTTTACATGC AGAAGGCAGC ACGCGAAGCC
AAGCTCCATA CCCGCTGGAC CCATCCGGAC GAGAACTACG AGGCCGCGCT CGAAGGCTTC
GTGCGGGCGC TGCTGGGGCA CATTGAAAAC AACACCTTCC TCACCGAACT GCAGACGCTC
GGCGTGACGC TCGCGTGGTT CGGCGCGCTC AACAGCTTGA GCACGACCCT GCTCAAGTTG
TCCTCCCCGG GTGTGCCCGA CTTCTATCAG GGCCACGAGA CCATCGGGCT GACGCTGGTG
GACCCGGACA ATCGCCGGCC CGTTGACTAT GAGGCACTGA ATCAAAGTCT TGCCTCATTG
GAGTCCCTCG ATCCAACGCA GTTGCCAACG CTGATGACCG CGCCGCAGGA CGGCCGCGCC
AAGCTGTGGA TCACCTGGCG TCTGCTGGCC CTGCGGCGCG AGCGGCCGGC GCTGTTTCGC
GATGGCGACT ACACCGCGCT CAAGGTCAGC GGCGCGCATG CCCAGCACGT GGTCGCGTTC
ACGCGTCGCC ATGAAGGCGC AACGCTGGTG GTCATTGCCG GACGCTTGTT CGCCCGGCTG
CTCGGGGAAG CGATCCTCCC ACCACTGGGC GAGTCCGTCT GGGCCGACAC CACAGTTGCG
ATCAATCTGC CCGACGGCAC GCGATTGACC AATGCACTGA CCGACGAGAC ACTCATCGTC
GAACACGGGC ACATCAAGCT GGGCGCAGCA TTCGCGCGCC TGCCGGCCGC CGCGTTGCTC
GGTCCGACTT GA
 
Protein sequence
MSSPWTEHNA QPLNQLCAHF GIATDYDDIW GTRHPVAHAS LLALLSDFGV TLADESDTPD 
ALDAVLRCAW RQALPPVVTI QASAPAWDVS LRLPASLTHI RWQLRDETGT LHQGEVAADA
LPEIARTELD GVAWCERQLS FSLRLAAGYH RLSVADLAGE TLVISAPERC YRPAALQNGG
KVWGPTVQLY ALRSRRNWGI GDFSDLAQLV GQMAERGADI IGLSPLHALF VHNPAHASPY
SPSSRLQLNV LYIDVDAVDD YASCEALGRL VHSAEFQGRL ARLREAPLVD YVGVAAVKFE
ALELLFSHFR EHHLTPDGLQ AGDDAGRTFL AFVVQGGEAL YRHALFEALQ AHFHANDATI
GGWPGWPLAY QDPDSPEVKS FAEQHAERVR YHLYLQWLAA SQLARASDHC QALGMGVGLY
VDLAVSVDRA GSDVWCERAC FAADASIGAP PDEFNPNGQG WGLPPLRPDR LRASQYRYFI
DTLRANMRGA GALRIDHVMG LMRLFWLPPG QTAREGTYVH YALDEMLAIV ALESQRNRCM
VIGEDLGTVA GEVRSALARF DVLSYRLLYF ERQDNGEFKP ATDYPANALV AVSTHDLATL
AGWWWGLDLR LRLQLGLFPD LQVFENQLLD RAQERVRLLS ALHRAGLLSA AEVADALAGP
DLSAHAVQAV HAFLAATPCA LMTVQLEDAL GVAEQINMPG TTDEQPNWRR KLPLDLAALA
THEVMLSLGR TLSGLRPRWS GGASNRSRAR ATVPRATYRL QFHKDFTFMD AIRILPYLAR
LGVSHVYCSP IQRARAGSMH GYDVVDHSEV NPELGGREGF ERFAAALLER GMGMLLDMVP
NHMGVMGGDN AWWMDVLENG PASLYAQHFD IDWQPLNPEL TGKVLLPVLS DHYGDVLMSG
NIVLHFEDST GSLALRYFDH CFPLAPESYP QVLMLAQARL GDVDLAASLA STATAFGHLP
GRDASDPGAR TERARDKELL KTRLARLAAR QASVAQAIAS AVAELNLAGA RDALHALIEA
QAYRLAYWRV AVDEINYRRF FDINELAALR MEREDVFEAT QSFALDLAAA GLVDGLRIDH
PDGLYDPARY FQQLQEGYAR RAGLLLEGPD EQGRPARPLY VVAEKIAALH EEIPLDWHIH
GMTGYRFANS VNGLLVDPSA AAKFALIWRN FTAISESFDE LAYAGKRDII RTSLASELNV
LSTELLRIAR ADRRTRDYTL NALRRALTEV AACLPVYRTY FIDQASAQDQ RYVDWAVRDA
EHHSQDADLS IFGFVRQTLL GQALPDASDS LRQRVRRFAN RFQQFSAPVA AKGVEDTAFY
RYFPLCSLNE VGGDPSRFGV TVAAFHADNA TRAEHWPHNM LATSTHDNKR SEDVRNRINV
LSEMPARWRL ALRRWRSQHR GLRHKLEAAS AAVGAPSHAD EYLLYQTLLG TLPVGDLNET
TLAPYRERVV LYMQKAAREA KLHTRWTHPD ENYEAALEGF VRALLGHIEN NTFLTELQTL
GVTLAWFGAL NSLSTTLLKL SSPGVPDFYQ GHETIGLTLV DPDNRRPVDY EALNQSLASL
ESLDPTQLPT LMTAPQDGRA KLWITWRLLA LRRERPALFR DGDYTALKVS GAHAQHVVAF
TRRHEGATLV VIAGRLFARL LGEAILPPLG ESVWADTTVA INLPDGTRLT NALTDETLIV
EHGHIKLGAA FARLPAAALL GPT