Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2156 |
Symbol | |
ID | 3961207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2340122 |
End bp | 2345233 |
Gene Length | 5112 bp |
Protein Length | 1703 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637916976 |
Product | putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase |
Protein accession | YP_523411 |
Protein GI | 89900940 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase [TIGR02401] malto-oligosyltrehalose synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.57322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCTAGCC CGTGGACCGA GCACAACGCG CAGCCGTTGA ATCAACTGTG CGCACACTTT GGCATTGCCA CTGACTACGA TGACATCTGG GGCACGCGCC ACCCGGTAGC ACACGCGAGC TTGCTGGCCC TGCTGTCGGA TTTCGGCGTC ACACTGGCTG ACGAATCGGA CACGCCTGAC GCACTCGATG CCGTGCTGCG CTGTGCCTGG CGCCAGGCCC TGCCGCCAGT GGTGACAATT CAGGCGTCGG CGCCGGCGTG GGACGTGTCA CTGCGCCTGC CCGCCTCGCT GACCCACATC CGCTGGCAAC TGCGCGACGA AACCGGTACC TTGCACCAGG GCGAGGTCGC CGCCGATGCG CTGCCCGAGA TCGCCCGCAC CGAACTCGAC GGTGTCGCCT GGTGCGAGCG CCAGCTGTCT TTCAGCTTGC GATTGGCCGC TGGCTACCAT CGCCTGAGCG TGGCGGACCT GGCCGGCGAG ACCCTGGTGA TCAGCGCGCC CGAGCGTTGC TATCGTCCGG CAGCGCTGCA AAACGGCGGC AAAGTCTGGG GACCGACCGT ACAACTGTAT GCGCTGCGCT CCCGGCGCAA TTGGGGCATT GGCGACTTCA GCGATCTGGC GCAGCTGGTC GGACAGATGG CCGAACGCGG TGCCGACATC ATTGGACTCA GCCCCTTGCA CGCGCTGTTC GTGCATAACC CGGCCCATGC CAGCCCTTAC AGCCCCTCCT CGCGCCTGCA GCTCAACGTG CTGTACATCG ATGTCGATGC GGTCGATGAC TACGCCAGCT GTGAAGCGCT GGGACGGCTT GTCCATTCCG CCGAATTCCA GGGCCGGCTG GCGCGCTTGC GCGAGGCGCC ACTGGTCGAC TATGTTGGGG TTGCCGCAGT CAAATTCGAG GCGCTCGAAT TGCTGTTCAG TCATTTCCGA GAACACCATC TGACCCCCGA CGGTCTGCAG GCGGGCGACG ACGCCGGACG CACCTTTCTC GCGTTCGTGG TGCAGGGCGG CGAAGCGTTG TACCGCCATG CCCTCTTTGA AGCGCTGCAG GCGCATTTCC ATGCCAACGA TGCCACCATT GGCGGTTGGC CGGGATGGCC GCTGGCGTAC CAGGATCCCG ACAGTCCTGA GGTGAAATCC TTCGCGGAGC AACACGCCGA GCGTGTGCGG TACCACCTGT ACCTGCAATG GTTGGCGGCC AGCCAATTGG CACGCGCGAG CGACCACTGC CAGGCGCTGG GAATGGGTGT GGGCCTGTAT GTTGACCTCG CCGTCTCGGT CGATCGAGCG GGCTCCGATG TCTGGTGCGA GCGCGCGTGC TTTGCCGCGG ATGCCAGCAT CGGCGCCCCG CCCGATGAGT TCAATCCGAA TGGCCAGGGC TGGGGCTTGC CGCCGCTGCG GCCGGACCGC CTGCGCGCCA GCCAGTATCG GTACTTCATC GACACCTTGC GCGCCAATAT GCGCGGTGCG GGCGCGCTGC GCATTGACCA TGTGATGGGC TTGATGCGCC TGTTCTGGCT ACCCCCTGGG CAGACCGCGC GCGAAGGCAC TTACGTGCAT TACGCGCTGG ACGAGATGCT GGCCATCGTG GCATTGGAGA GCCAGCGTAA CCGCTGCATG GTGATCGGTG AAGACCTGGG CACCGTGGCC GGCGAGGTGC GTTCGGCGCT GGCGCGTTTT GACGTGCTGT CCTATCGCCT GCTGTACTTC GAACGCCAGG ACAATGGCGA ATTCAAACCG GCGACCGACT ACCCGGCGAA TGCGCTGGTG GCCGTCAGCA CGCACGACCT GGCGACACTG GCCGGCTGGT GGTGGGGGCT GGACTTGCGC CTGCGCCTGC AGCTCGGCCT GTTCCCCGAC CTGCAGGTCT TCGAGAACCA ATTGCTCGAC CGCGCCCAGG AGCGCGTGCG GCTCCTGTCA GCGCTGCACC GCGCCGGCCT GTTGTCGGCG GCCGAAGTGG CCGATGCGCT GGCCGGGCCG GACCTGTCGG CGCACGCCGT GCAAGCGGTG CACGCGTTTC TGGCGGCGAC GCCGTGCGCG CTCATGACCG TCCAGCTCGA GGACGCGCTC GGCGTAGCGG AGCAAATCAA CATGCCCGGC ACCACCGATG AGCAACCCAA CTGGCGGCGC AAGCTGCCGC TGGACCTGGC CGCACTGGCC ACCCACGAGG TGATGCTGAG TCTGGGCCGT ACCCTGTCCG GGCTGCGGCC ACGCTGGTCC GGTGGGGCCT CCAACCGCAG CCGTGCCCGG GCGACGGTGC CGCGCGCCAC CTACCGGCTT CAGTTCCACA AAGATTTCAC CTTCATGGAT GCCATCCGCA TCCTGCCCTA CCTCGCGCGC CTGGGTGTGA GTCATGTTTA CTGCTCGCCG ATCCAGCGGG CGCGCGCCGG CAGCATGCAC GGCTACGACG TGGTGGATCA CAGTGAGGTC AACCCCGAGC TGGGCGGACG CGAAGGCTTC GAGCGCTTCG CCGCAGCCTT GCTTGAACGC GGCATGGGCA TGTTGCTCGA CATGGTGCCC AACCACATGG GCGTCATGGG CGGTGACAAC GCCTGGTGGA TGGACGTGCT GGAGAACGGG CCGGCCTCGC TTTATGCCCA GCACTTCGAC ATCGACTGGC AGCCGCTCAA CCCCGAACTC ACCGGCAAAG TGCTGCTCCC GGTGCTGAGC GACCACTATG GCGACGTCCT CATGAGTGGC AACATCGTGC TGCACTTTGA AGACAGCACG GGCAGCCTGG CGCTGCGTTA CTTTGACCAT TGTTTTCCGC TGGCGCCCGA GAGCTACCCG CAGGTCTTGA TGCTGGCGCA GGCGCGGCTC GGTGATGTGG ACCTGGCCGC CAGCCTGGCC AGCACGGCCA CCGCTTTCGG TCACCTGCCC GGACGCGACG CCAGCGACCC CGGCGCGCGC ACTGAGCGCG CGCGTGACAA GGAACTGCTC AAGACCCGCC TGGCGCGGCT GGCGGCGCGC CAGGCGAGCG TGGCGCAGGC CATCGCCAGC GCGGTGGCGG AACTCAATCT GGCGGGCGCC CGCGACGCGC TGCATGCGCT GATCGAAGCC CAGGCCTACC GGCTCGCCTA CTGGCGCGTC GCCGTCGACG AGATCAACTA CCGGCGCTTC TTCGACATCA ATGAGCTCGC CGCCCTGCGC ATGGAGCGCG AAGACGTGTT CGAAGCCACG CAGTCGTTCG CGCTGGACCT CGCGGCAGCC GGCCTGGTGG ATGGGCTGCG CATCGATCAT CCGGATGGGC TGTATGATCC GGCACGTTAT TTCCAGCAGT TGCAGGAGGG CTACGCGCGA CGCGCCGGCC TGCTGCTGGA AGGCCCGGAC GAGCAGGGTC GGCCAGCGCG ACCGCTGTAT GTCGTGGCGG AAAAAATCGC CGCGCTCCAC GAGGAGATTC CGCTGGACTG GCACATCCAC GGCATGACCG GCTACCGTTT TGCCAACTCG GTCAACGGGC TGCTGGTTGA CCCCTCGGCG GCGGCCAAAT TCGCGCTGAT CTGGCGCAAC TTCACCGCAA TCAGCGAGAG TTTCGACGAG TTGGCCTATG CCGGCAAGCG CGACATCATT CGCACGTCGC TGGCCTCCGA ACTCAATGTC CTGTCAACCG AACTGCTGCG CATCGCCCGC GCCGACCGGC GCACCCGCGA CTACACACTC AATGCGCTGC GCCGCGCCTT GACCGAGGTG GCCGCCTGCC TGCCGGTCTA TCGCACCTAC TTCATTGACC AGGCCTCGGC GCAGGACCAG CGCTATGTGG ACTGGGCCGT GCGTGATGCC GAGCACCACA GCCAGGACGC CGACCTGTCG ATCTTCGGCT TCGTGCGCCA GACCCTGCTC GGGCAGGCGC TGCCCGATGC CTCGGACAGC CTGCGCCAGC GCGTGCGCCG CTTCGCCAAC CGGTTCCAGC AATTCAGTGC GCCGGTGGCG GCCAAGGGCG TCGAGGACAC CGCTTTTTAC CGCTATTTCC CCTTGTGTTC TCTCAACGAA GTCGGCGGCG ACCCAAGCCG TTTCGGCGTC ACGGTGGCCG CCTTCCACGC CGACAACGCC ACAAGAGCAG AGCACTGGCC GCACAACATG CTGGCCACAT CCACCCACGA CAACAAGCGC TCGGAGGACG TGCGTAATCG CATCAACGTG CTGTCCGAAA TGCCGGCGCG CTGGCGCCTG GCCTTGCGCC GCTGGCGCAG CCAGCACCGC GGCCTGCGCC ACAAGCTGGA GGCGGCCAGT GCAGCAGTGG GGGCGCCCTC GCACGCCGAC GAGTACCTGC TGTACCAGAC GCTCCTGGGC ACGCTGCCCG TGGGCGACTT GAACGAGACG ACGCTGGCGC CCTACCGCGA ACGCGTGGTG CTTTACATGC AGAAGGCAGC ACGCGAAGCC AAGCTCCATA CCCGCTGGAC CCATCCGGAC GAGAACTACG AGGCCGCGCT CGAAGGCTTC GTGCGGGCGC TGCTGGGGCA CATTGAAAAC AACACCTTCC TCACCGAACT GCAGACGCTC GGCGTGACGC TCGCGTGGTT CGGCGCGCTC AACAGCTTGA GCACGACCCT GCTCAAGTTG TCCTCCCCGG GTGTGCCCGA CTTCTATCAG GGCCACGAGA CCATCGGGCT GACGCTGGTG GACCCGGACA ATCGCCGGCC CGTTGACTAT GAGGCACTGA ATCAAAGTCT TGCCTCATTG GAGTCCCTCG ATCCAACGCA GTTGCCAACG CTGATGACCG CGCCGCAGGA CGGCCGCGCC AAGCTGTGGA TCACCTGGCG TCTGCTGGCC CTGCGGCGCG AGCGGCCGGC GCTGTTTCGC GATGGCGACT ACACCGCGCT CAAGGTCAGC GGCGCGCATG CCCAGCACGT GGTCGCGTTC ACGCGTCGCC ATGAAGGCGC AACGCTGGTG GTCATTGCCG GACGCTTGTT CGCCCGGCTG CTCGGGGAAG CGATCCTCCC ACCACTGGGC GAGTCCGTCT GGGCCGACAC CACAGTTGCG ATCAATCTGC CCGACGGCAC GCGATTGACC AATGCACTGA CCGACGAGAC ACTCATCGTC GAACACGGGC ACATCAAGCT GGGCGCAGCA TTCGCGCGCC TGCCGGCCGC CGCGTTGCTC GGTCCGACTT GA
|
Protein sequence | MSSPWTEHNA QPLNQLCAHF GIATDYDDIW GTRHPVAHAS LLALLSDFGV TLADESDTPD ALDAVLRCAW RQALPPVVTI QASAPAWDVS LRLPASLTHI RWQLRDETGT LHQGEVAADA LPEIARTELD GVAWCERQLS FSLRLAAGYH RLSVADLAGE TLVISAPERC YRPAALQNGG KVWGPTVQLY ALRSRRNWGI GDFSDLAQLV GQMAERGADI IGLSPLHALF VHNPAHASPY SPSSRLQLNV LYIDVDAVDD YASCEALGRL VHSAEFQGRL ARLREAPLVD YVGVAAVKFE ALELLFSHFR EHHLTPDGLQ AGDDAGRTFL AFVVQGGEAL YRHALFEALQ AHFHANDATI GGWPGWPLAY QDPDSPEVKS FAEQHAERVR YHLYLQWLAA SQLARASDHC QALGMGVGLY VDLAVSVDRA GSDVWCERAC FAADASIGAP PDEFNPNGQG WGLPPLRPDR LRASQYRYFI DTLRANMRGA GALRIDHVMG LMRLFWLPPG QTAREGTYVH YALDEMLAIV ALESQRNRCM VIGEDLGTVA GEVRSALARF DVLSYRLLYF ERQDNGEFKP ATDYPANALV AVSTHDLATL AGWWWGLDLR LRLQLGLFPD LQVFENQLLD RAQERVRLLS ALHRAGLLSA AEVADALAGP DLSAHAVQAV HAFLAATPCA LMTVQLEDAL GVAEQINMPG TTDEQPNWRR KLPLDLAALA THEVMLSLGR TLSGLRPRWS GGASNRSRAR ATVPRATYRL QFHKDFTFMD AIRILPYLAR LGVSHVYCSP IQRARAGSMH GYDVVDHSEV NPELGGREGF ERFAAALLER GMGMLLDMVP NHMGVMGGDN AWWMDVLENG PASLYAQHFD IDWQPLNPEL TGKVLLPVLS DHYGDVLMSG NIVLHFEDST GSLALRYFDH CFPLAPESYP QVLMLAQARL GDVDLAASLA STATAFGHLP GRDASDPGAR TERARDKELL KTRLARLAAR QASVAQAIAS AVAELNLAGA RDALHALIEA QAYRLAYWRV AVDEINYRRF FDINELAALR MEREDVFEAT QSFALDLAAA GLVDGLRIDH PDGLYDPARY FQQLQEGYAR RAGLLLEGPD EQGRPARPLY VVAEKIAALH EEIPLDWHIH GMTGYRFANS VNGLLVDPSA AAKFALIWRN FTAISESFDE LAYAGKRDII RTSLASELNV LSTELLRIAR ADRRTRDYTL NALRRALTEV AACLPVYRTY FIDQASAQDQ RYVDWAVRDA EHHSQDADLS IFGFVRQTLL GQALPDASDS LRQRVRRFAN RFQQFSAPVA AKGVEDTAFY RYFPLCSLNE VGGDPSRFGV TVAAFHADNA TRAEHWPHNM LATSTHDNKR SEDVRNRINV LSEMPARWRL ALRRWRSQHR GLRHKLEAAS AAVGAPSHAD EYLLYQTLLG TLPVGDLNET TLAPYRERVV LYMQKAAREA KLHTRWTHPD ENYEAALEGF VRALLGHIEN NTFLTELQTL GVTLAWFGAL NSLSTTLLKL SSPGVPDFYQ GHETIGLTLV DPDNRRPVDY EALNQSLASL ESLDPTQLPT LMTAPQDGRA KLWITWRLLA LRRERPALFR DGDYTALKVS GAHAQHVVAF TRRHEGATLV VIAGRLFARL LGEAILPPLG ESVWADTTVA INLPDGTRLT NALTDETLIV EHGHIKLGAA FARLPAAALL GPT
|
| |