Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2150 |
Symbol | |
ID | 3961201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2334377 |
End bp | 2335156 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916970 |
Product | band 7 protein |
Protein accession | YP_523405 |
Protein GI | 89900934 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACTGGG AACTCGGATA CGGCTTCATC CCGATTGTGC TGATCATGCT GGTGGTCGCA TCGGTGCGCA TTCTGCGCGA GTACGAGCGC GGCGTGGTGT TCCAGTTGGG GCGGTTCTGG AAAGTCAAAG GCCCGGGTTT GATCATTTTG ATGCCCGGCG TCCAGCAGAT GGTGCGCGTG GATCTGCGCA CCGTGGTGAT GGATGTACCG CCGCAGGATG TGATCACGCG CGACAACGTG TCGGTCAAGG TCAACGCCGT GGTCTACGCC CGCGTGGTGG ATCCGCAGCT CGCCATCATC CAGGTCGAAA ATTACATGCT GGCCACGTCG CAGCTGGCGC AGACGACCTT GCGTGCCATT CTTGGCAAGC ACGAGCTTGA CCAGTTGCTG GCCGAGCGCG ACAAGATCAA CCAGGCACTG CAGCAGGTGC TTGATGTGCA GACTGACGCC TGGGGCATCA AGGTCTCGAA GGTGGAGATC AAGAACGTCG ATTTGAACGA AAGCATGGTG CGCGCCATTG CCAAGCAGGC CGAAGCCGAA CGCGAGCGGC GCGCCAAGAT CATTCATGCC GAGGGTGAAT TGCAGGCGTC CGCCAAGCTG CTGGAGGCGG CGCAAAAATT GGCGCAGGCC CCGCAGGCCA TGCAGTTGCG CTACCTGCAG ACGCTCACGG CGATTGCCGG GGAAAAGAGT TCCACCATCA TTTTCCCGAT GCCGATTGAT CTGATTTCGT CGGTGCTGGA TCGCCTGTCT GAGCGGCCAA AGTCAGCGGC GCCTGGCTGA
|
Protein sequence | MYWELGYGFI PIVLIMLVVA SVRILREYER GVVFQLGRFW KVKGPGLIIL MPGVQQMVRV DLRTVVMDVP PQDVITRDNV SVKVNAVVYA RVVDPQLAII QVENYMLATS QLAQTTLRAI LGKHELDQLL AERDKINQAL QQVLDVQTDA WGIKVSKVEI KNVDLNESMV RAIAKQAEAE RERRAKIIHA EGELQASAKL LEAAQKLAQA PQAMQLRYLQ TLTAIAGEKS STIIFPMPID LISSVLDRLS ERPKSAAPG
|
| |